Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 MIR3117-201ENST00000584034 78 ntBASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 BNIP3P7-201ENST00000605641 516 ntBASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 AC120053.1-201ENST00000607706 736 ntBASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 AL355810.1-201ENST00000614629 552 ntBASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 AP003072.5-201ENST00000623872 773 ntBASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 AC243829.7-201ENST00000633081 225 ntBASIC1.41□□□□□ -2.18
CDC42SE2Q9NRR3 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.4□□□□□ -2.18
CDC42SE2Q9NRR3 CENPCP1-201ENST00000533085 2578 ntBASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 AC006020.1-201ENST00000420179 1854 ntBASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 MTND5P6-201ENST00000422338 1798 ntBASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 ANKRD36P1-201ENST00000344424 659 ntBASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 RNA5SP289-201ENST00000362332 137 ntBASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 SNORA38-201ENST00000363946 132 ntBASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 CBWD4P-201ENST00000445695 655 ntBASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 COX6CP12-201ENST00000446748 202 ntBASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 FABP5P6-201ENST00000510588 409 ntBASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 AC133963.2-201ENST00000513686 578 ntBASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 AC034244.2-201ENST00000514668 858 ntBASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 SNORA31.8-201ENST00000516327 108 ntBASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 RNU6-1308P-201ENST00000516817 103 ntBASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 RNA5SP364-201ENST00000516938 78 ntBASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 AC068339.2-201ENST00000534395 618 ntBASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 AC026464.5-201ENST00000562497 722 ntBASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 AC009097.3-201ENST00000563557 1018 ntBASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 AC010546.1-201ENST00000569391 485 ntBASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 MIR4448-201ENST00000584360 86 ntBASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 HSPE1P7-201ENST00000604681 321 ntBASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 VN1R74P-201ENST00000613259 503 ntBASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 MTND4P31-201ENST00000425607 1343 ntBASIC1.4□□□□□ -2.19
CDC42SE2Q9NRR3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 RNU1-73P-201ENST00000383971 164 ntBASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 SUMO2P12-201ENST00000405924 140 ntBASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 AL513475.1-201ENST00000406602 315 ntBASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 RPL17P12-201ENST00000413391 526 ntBASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 AL356379.1-201ENST00000414105 126 ntBASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 ARL2BPP3-201ENST00000421226 480 ntBASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 TMEM167AP1-201ENST00000423409 219 ntBASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 AC027124.2-201ENST00000428249 105 ntBASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 UBE2FP3-201ENST00000436366 524 ntBASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 PSPHP1-201ENST00000450062 261 ntBASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 HMGB1P26-201ENST00000452520 628 ntBASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 AC097493.1-201ENST00000463958 372 ntBASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 AC008413.1-201ENST00000511864 177 ntBASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 AC114781.4-201ENST00000513707 639 ntBASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 OR11H5P-201ENST00000554039 926 ntBASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 AGGF1P5-201ENST00000567900 919 ntBASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 MIR3162-201ENST00000581818 82 ntBASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 AL390838.2-201ENST00000602394 274 ntBASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 AC005332.10-201ENST00000612725 619 ntBASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 AL360181.4-201ENST00000621752 134 ntBASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 MIR6873-201ENST00000622788 63 ntBASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.39□□□□□ -2.19
CDC42SE2Q9NRR3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms