Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.3□□□□□ -1.88
HPS4Q9NQG7 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HPS4Q9NQG7 AC092185.1-201ENST00000491371 97 ntBASIC3.3□□□□□ -1.88
HPS4Q9NQG7 TMEM251P1-201ENST00000503717 318 ntBASIC3.3□□□□□ -1.88
HPS4Q9NQG7 AC097462.2-201ENST00000504623 481 ntBASIC3.3□□□□□ -1.88
HPS4Q9NQG7 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.3□□□□□ -1.88
HPS4Q9NQG7 AC107934.2-201ENST00000518653 310 ntBASIC3.3□□□□□ -1.88
HPS4Q9NQG7 AC018630.1-201ENST00000541376 925 ntBASIC3.3□□□□□ -1.88
HPS4Q9NQG7 AC022080.3-201ENST00000544433 482 ntBASIC3.3□□□□□ -1.88
HPS4Q9NQG7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.3□□□□□ -1.88
HPS4Q9NQG7 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.3□□□□□ -1.88
HPS4Q9NQG7 UBL5P2-201ENST00000583788 219 ntBASIC3.3□□□□□ -1.88
HPS4Q9NQG7 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.3□□□□□ -1.88
HPS4Q9NQG7 AC245884.10-201ENST00000597355 337 ntBASIC3.3□□□□□ -1.88
HPS4Q9NQG7 MTND3P19-201ENST00000603825 345 ntBASIC3.3□□□□□ -1.88
HPS4Q9NQG7 AC107294.3-201ENST00000609211 526 ntBASIC3.3□□□□□ -1.88
HPS4Q9NQG7 AC243773.3-201ENST00000613270 256 ntBASIC3.3□□□□□ -1.88
HPS4Q9NQG7 AP003122.6-201ENST00000623831 495 ntBASIC3.3□□□□□ -1.88
HPS4Q9NQG7 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HPS4Q9NQG7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HPS4Q9NQG7 OR5H2-201ENST00000355273 945 ntBASIC3.29□□□□□ -1.88
HPS4Q9NQG7 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HPS4Q9NQG7 RNU1-140P-201ENST00000365040 165 ntBASIC3.29□□□□□ -1.88
HPS4Q9NQG7 RNU6-1074P-201ENST00000383995 104 ntBASIC3.29□□□□□ -1.88
HPS4Q9NQG7 RNU6-1122P-201ENST00000384449 107 ntBASIC3.29□□□□□ -1.88
HPS4Q9NQG7 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.29□□□□□ -1.88
HPS4Q9NQG7 AL356968.1-201ENST00000416622 474 ntBASIC3.29□□□□□ -1.88
HPS4Q9NQG7 AL513175.2-201ENST00000422071 443 ntBASIC3.29□□□□□ -1.88
HPS4Q9NQG7 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.29□□□□□ -1.88
HPS4Q9NQG7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.29□□□□□ -1.88
HPS4Q9NQG7 RPL35AP12-201ENST00000425362 338 ntBASIC3.29□□□□□ -1.88
HPS4Q9NQG7 DUTP6-201ENST00000425573 462 ntBASIC3.29□□□□□ -1.88
HPS4Q9NQG7 MTND2P5-201ENST00000432656 1006 ntBASIC3.29□□□□□ -1.88
HPS4Q9NQG7 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.29□□□□□ -1.88
HPS4Q9NQG7 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.29□□□□□ -1.88
HPS4Q9NQG7 AC005297.2-201ENST00000450430 606 ntBASIC3.29□□□□□ -1.88
HPS4Q9NQG7 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
HPS4Q9NQG7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.29□□□□□ -1.88
HPS4Q9NQG7 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.29□□□□□ -1.88
HPS4Q9NQG7 SUMO2P2-201ENST00000456482 255 ntBASIC3.29□□□□□ -1.88
HPS4Q9NQG7 AC005410.1-202ENST00000460347 485 ntBASIC3.29□□□□□ -1.88
HPS4Q9NQG7 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.29□□□□□ -1.88
HPS4Q9NQG7 AC134050.1-201ENST00000495088 933 ntBASIC3.29□□□□□ -1.88
HPS4Q9NQG7 AC090453.1-201ENST00000495560 436 ntBASIC3.29□□□□□ -1.88
HPS4Q9NQG7 MTCYBP17-201ENST00000503579 789 ntBASIC3.29□□□□□ -1.88
HPS4Q9NQG7 KCTD9P5-201ENST00000504141 1170 ntBASIC3.29□□□□□ -1.88
HPS4Q9NQG7 AC114967.1-201ENST00000504890 259 ntBASIC3.29□□□□□ -1.88
HPS4Q9NQG7 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.29□□□□□ -1.88
HPS4Q9NQG7 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.29□□□□□ -1.88
HPS4Q9NQG7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.29□□□□□ -1.88
HPS4Q9NQG7 RNU6-1095P-201ENST00000516148 108 ntBASIC3.29□□□□□ -1.88
HPS4Q9NQG7 SCARNA1-201ENST00000517138 166 ntBASIC3.29□□□□□ -1.88
HPS4Q9NQG7 AC068657.1-201ENST00000520807 306 ntBASIC3.29□□□□□ -1.88
HPS4Q9NQG7 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.29□□□□□ -1.88
HPS4Q9NQG7 AC023813.2-201ENST00000564321 469 ntBASIC3.29□□□□□ -1.88
HPS4Q9NQG7 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.29□□□□□ -1.88
HPS4Q9NQG7 AC006111.3-201ENST00000622137 383 ntBASIC3.29□□□□□ -1.88
HPS4Q9NQG7 AC004009.2-201ENST00000623016 728 ntBASIC3.29□□□□□ -1.88
HPS4Q9NQG7 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.29□□□□□ -1.88
HPS4Q9NQG7 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.29□□□□□ -1.88
HPS4Q9NQG7 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.28□□□□□ -1.88
HPS4Q9NQG7 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HPS4Q9NQG7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HPS4Q9NQG7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.28□□□□□ -1.88
HPS4Q9NQG7 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HPS4Q9NQG7 RNU4-68P-201ENST00000364314 141 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 AC106883.1-201ENST00000418805 562 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 RPL7P30-201ENST00000420888 709 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 RPL23AP82-202ENST00000427528 469 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 EZH2P1-201ENST00000431167 291 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HPS4Q9NQG7 FTH1P1-201ENST00000437933 532 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.28□□□□□ -1.88
HPS4Q9NQG7 AC140076.1-201ENST00000449897 361 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 AL009048.1-201ENST00000450437 298 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 RPL18AP17-201ENST00000455326 198 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 CENPBD1P1-201ENST00000464061 469 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 UBE2DNL-203ENST00000474922 222 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 SNORA31.1-201ENST00000515993 133 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 RNU6-583P-201ENST00000516012 92 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 SNORA31.5-201ENST00000516190 133 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.28□□□□□ -1.88
HPS4Q9NQG7 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HPS4Q9NQG7 AC104027.1-201ENST00000521887 300 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 HSPA8P13-201ENST00000523715 472 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 PSMA2P1-201ENST00000526365 646 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.28□□□□□ -1.88
HPS4Q9NQG7 AP001269.3-201ENST00000588718 329 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 RPP40P2-201ENST00000603596 712 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 AC009220.3-201ENST00000604318 586 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 AC093732.2-201ENST00000607950 274 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 AC004832.5-201ENST00000608677 401 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 AC016597.2-201ENST00000613256 341 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 AC025588.4-201ENST00000615802 908 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 AC091046.2-201ENST00000620775 665 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 AL360181.4-201ENST00000621752 134 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
HPS4Q9NQG7 AC090740.1-201ENST00000623193 2262 ntBASIC3.28□□□□□ -1.88
HPS4Q9NQG7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
HPS4Q9NQG7 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms