Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.06□□□□□ -1.92
TM9SF3Q9HD45 AC091057.2-201ENST00000602594 792 ntBASIC3.06□□□□□ -1.92
TM9SF3Q9HD45 RPL12P50-201ENST00000603116 116 ntBASIC3.06□□□□□ -1.92
TM9SF3Q9HD45 AP000526.1-201ENST00000603308 1388 ntBASIC3.06□□□□□ -1.92
TM9SF3Q9HD45 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.06□□□□□ -1.92
TM9SF3Q9HD45 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.06□□□□□ -1.92
TM9SF3Q9HD45 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
TM9SF3Q9HD45 AL035425.3-201ENST00000564206 4996 ntBASIC3.06□□□□□ -1.92
TM9SF3Q9HD45 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
TM9SF3Q9HD45 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TM9SF3Q9HD45 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 RNU6-207P-201ENST00000384137 107 ntBASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 RNU6-1197P-201ENST00000391183 107 ntBASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 RN7SKP58-201ENST00000411010 305 ntBASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 AC092638.1-201ENST00000411966 1275 ntBASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 AC109583.1-201ENST00000432156 268 ntBASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 AC112492.1-201ENST00000449607 712 ntBASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 AC010099.1-201ENST00000455434 375 ntBASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 RN7SL75P-201ENST00000461926 281 ntBASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 AL049714.1-201ENST00000466686 347 ntBASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 AC112198.4-201ENST00000515450 351 ntBASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 MTND2P7-201ENST00000521337 640 ntBASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 CR383656.7-201ENST00000548164 174 ntBASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 MIR4672-201ENST00000583126 81 ntBASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 MAGOH2P-202ENST00000584384 429 ntBASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 AC015688.2-201ENST00000584523 262 ntBASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 AC006116.7-201ENST00000590141 756 ntBASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 AC019159.1-201ENST00000605094 187 ntBASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 AC068880.4-201ENST00000623082 495 ntBASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 AC091903.1-201ENST00000624322 454 ntBASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 MTND5P24-201ENST00000438892 1767 ntBASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TM9SF3Q9HD45 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 SNORD56.5-201ENST00000364281 72 ntBASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 AL603865.2-201ENST00000401679 213 ntBASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 RPL7P25-201ENST00000404151 721 ntBASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 AC069282.1-201ENST00000411911 526 ntBASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 AC092634.6-201ENST00000418558 192 ntBASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 BEND7P1-201ENST00000422058 457 ntBASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 PSMA6P3-201ENST00000428242 164 ntBASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 AC092393.1-201ENST00000439625 742 ntBASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 UBBP3-201ENST00000445497 241 ntBASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 RPS29P26-201ENST00000477483 171 ntBASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 SNORA48.10-201ENST00000516965 160 ntBASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 AC027309.2-201ENST00000520566 192 ntBASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 MTATP6P2-201ENST00000603319 678 ntBASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 RPAP2P1-201ENST00000603626 1168 ntBASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 AP000254.1-201ENST00000609934 520 ntBASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 AC080188.3-201ENST00000624842 748 ntBASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
TM9SF3Q9HD45 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TM9SF3Q9HD45 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
TM9SF3Q9HD45 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
TM9SF3Q9HD45 HMGB1P5-201ENST00000255320 642 ntBASIC3.03□□□□□ -1.92
TM9SF3Q9HD45 OR5J1P-201ENST00000313544 939 ntBASIC3.03□□□□□ -1.92
TM9SF3Q9HD45 SNORA46-201ENST00000384762 135 ntBASIC3.03□□□□□ -1.92
TM9SF3Q9HD45 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.03□□□□□ -1.92
TM9SF3Q9HD45 AL139132.1-201ENST00000431587 344 ntBASIC3.03□□□□□ -1.92
TM9SF3Q9HD45 AC092573.2-201ENST00000434546 243 ntBASIC3.03□□□□□ -1.92
TM9SF3Q9HD45 AC024082.2-201ENST00000434771 238 ntBASIC3.03□□□□□ -1.92
TM9SF3Q9HD45 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.03□□□□□ -1.92
TM9SF3Q9HD45 HMGB3P6-201ENST00000444896 598 ntBASIC3.03□□□□□ -1.92
TM9SF3Q9HD45 SEPT14P24-201ENST00000447236 180 ntBASIC3.03□□□□□ -1.92
TM9SF3Q9HD45 UQCRHP3-201ENST00000451503 251 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms