Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 RPS7P13-201ENST00000413955 498 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 CDK8P2-201ENST00000415020 547 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AL035423.1-201ENST00000420331 213 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 OFD1P18Y-201ENST00000420889 959 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AL356583.2-201ENST00000426536 280 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 USP9YP14-201ENST00000430663 563 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 MUPP-201ENST00000438111 566 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 RPL7P36-201ENST00000444633 681 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 MTCO1P42-201ENST00000457379 726 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 RN7SL542P-201ENST00000467147 294 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AP003033.1-201ENST00000527244 415 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AP002963.1-201ENST00000530590 184 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 MIR5697-201ENST00000578045 78 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AC025165.5-201ENST00000602802 578 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AC015871.2-201ENST00000603605 948 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AC100793.4-201ENST00000613683 429 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AC009509.4-201ENST00000619202 509 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AC048347.1-201ENST00000624621 427 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AL392088.2-201ENST00000637607 285 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 ZNF734P-201ENST00000419494 1534 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AL359893.1-201ENST00000447628 1580 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AC006378.2-201ENST00000623178 2476 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 RNA5SP124-201ENST00000362739 110 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 RNA5SP51-201ENST00000364750 119 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 RNA5SP189-201ENST00000364920 115 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 RNU6-730P-201ENST00000383954 104 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 RNU6-533P-201ENST00000384144 107 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 SNORA75-201ENST00000384158 137 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 SNORA70E-201ENST00000384492 135 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 MIR134-201ENST00000385258 73 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 PTMAP5-201ENST00000393073 333 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 RPL21P17-201ENST00000397467 475 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 MIR1305-201ENST00000408300 86 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 RN7SKP285-201ENST00000410137 318 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AC068533.1-201ENST00000418542 415 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AC122718.1-201ENST00000439448 744 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 ATP5C1P1-201ENST00000441945 895 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 RPS3AP46-201ENST00000448352 682 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AP000542.1-201ENST00000448473 371 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 RPL7P52-201ENST00000449200 742 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 PDSS1P2-201ENST00000449397 678 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 USP9YP12-201ENST00000450481 570 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AL590365.1-201ENST00000450788 243 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 SSXP1-201ENST00000453640 473 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AP001992.1-205ENST00000462248 379 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 FAM133DP-201ENST00000464802 691 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 RN7SL594P-201ENST00000470590 287 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AC104563.1-201ENST00000476147 376 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AP001025.2-201ENST00000490908 477 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AC078918.1-201ENST00000498515 228 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDH9Q9HC56 ARL2BPP4-201ENST00000506854 471 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 FABP5P5-201ENST00000515537 406 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 AC023632.4-201ENST00000517783 191 ntBASIC3.67□□□□□ -1.82
PCDH9Q9HC56 RANP9-201ENST00000519957 271 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms