Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AL359634.1-202ENST00000404721 284 ntBASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 RPL36AP36-201ENST00000418616 301 ntBASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 HSPE1P1-201ENST00000421494 318 ntBASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 RPS20P5-201ENST00000434808 360 ntBASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 AC005297.2-201ENST00000450430 606 ntBASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 MTND3P16-201ENST00000452205 344 ntBASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 FGF7P3-201ENST00000454645 303 ntBASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 Y_RNA.631-201ENST00000459607 101 ntBASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 AP000907.2-201ENST00000530827 353 ntBASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 AC068993.1-201ENST00000546724 589 ntBASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 OR6R2P-201ENST00000609216 300 ntBASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 SNX18P1Y-201ENST00000616231 511 ntBASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 AC010205.1-201ENST00000616668 449 ntBASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 AC034229.5-201ENST00000624258 185 ntBASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.88□□□□□ -1.63
BCAS3Q9H6U6 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 AC073343.1-201ENST00000328239 651 ntBASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 Y_RNA.144-201ENST00000363521 113 ntBASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 SNORA33.2-201ENST00000365413 134 ntBASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 Y_RNA.395-201ENST00000383945 109 ntBASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 RNU6-831P-201ENST00000384548 107 ntBASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 RPL5P18-201ENST00000406671 891 ntBASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 RPL6P29-201ENST00000414863 865 ntBASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 AL590233.1-201ENST00000430017 456 ntBASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 NANOGP10-201ENST00000453325 895 ntBASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 RNU7-152P-201ENST00000458982 64 ntBASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 RPL23AP11-201ENST00000475260 469 ntBASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 DEFB109F-201ENST00000491870 277 ntBASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 FAM206BP-201ENST00000510179 541 ntBASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 AC021146.1-201ENST00000511202 716 ntBASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 RNU4-29P-201ENST00000515943 174 ntBASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 Y_RNA.711-201ENST00000516993 102 ntBASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 SNORA25.17-201ENST00000517184 124 ntBASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 AC006272.2-201ENST00000594725 163 ntBASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 AL021997.2-201ENST00000615674 271 ntBASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 AC138305.3-201ENST00000624988 240 ntBASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 AC009902.3-201ENST00000606235 2172 ntBASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.87□□□□□ -1.63
BCAS3Q9H6U6 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.86□□□□□ -1.63
BCAS3Q9H6U6 AL445437.1-201ENST00000623157 3087 ntBASIC4.86□□□□□ -1.63
BCAS3Q9H6U6 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
BCAS3Q9H6U6 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
BCAS3Q9H6U6 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.86□□□□□ -1.63
BCAS3Q9H6U6 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.86□□□□□ -1.63
BCAS3Q9H6U6 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
BCAS3Q9H6U6 Y_RNA.259-201ENST00000364619 101 ntBASIC4.86□□□□□ -1.63
BCAS3Q9H6U6 Y_RNA.579-201ENST00000390939 94 ntBASIC4.86□□□□□ -1.63
BCAS3Q9H6U6 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.86□□□□□ -1.63
BCAS3Q9H6U6 RPS15AP12-201ENST00000419498 388 ntBASIC4.86□□□□□ -1.63
BCAS3Q9H6U6 AL451054.2-201ENST00000420896 202 ntBASIC4.86□□□□□ -1.63
BCAS3Q9H6U6 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.86□□□□□ -1.63
BCAS3Q9H6U6 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.86□□□□□ -1.63
BCAS3Q9H6U6 HMGB1P15-201ENST00000453854 435 ntBASIC4.86□□□□□ -1.63
BCAS3Q9H6U6 RNA5SP103-201ENST00000459503 118 ntBASIC4.86□□□□□ -1.63
BCAS3Q9H6U6 AC104057.1-201ENST00000515547 497 ntBASIC4.86□□□□□ -1.63
BCAS3Q9H6U6 RNU6-347P-201ENST00000516658 105 ntBASIC4.86□□□□□ -1.63
BCAS3Q9H6U6 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.86□□□□□ -1.63
BCAS3Q9H6U6 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.86□□□□□ -1.63
BCAS3Q9H6U6 TVP23BP1-201ENST00000557500 617 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms