Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 IFNWP4-201ENST00000453148 294 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 PMCHL2-203ENST00000457791 237 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 ST13P14-201ENST00000474095 734 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 RPL12P20-201ENST00000475538 479 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 RPS26P15-201ENST00000488067 348 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 HIGD1AP3-201ENST00000515857 278 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 SCARNA24.1-201ENST00000516465 137 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 CENPUP1-201ENST00000526649 1202 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 PHBP17-201ENST00000528576 541 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 COX6CP3-201ENST00000580869 223 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 AC115621.1-201ENST00000604653 858 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 AL035413.2-201ENST00000604801 525 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 AL590392.1-201ENST00000604960 446 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 BNIP3P10-201ENST00000605360 577 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 AC012603.1-201ENST00000606424 528 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 AC068724.3-201ENST00000625906 87 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 AL049555.1-201ENST00000562834 1933 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 SNORD113.2-201ENST00000364166 89 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 RNU6-74P-201ENST00000384235 107 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 MIR1250-201ENST00000408098 113 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 RNA5SP118-201ENST00000410385 109 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 MIR1911-201ENST00000410783 80 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 RN7SKP106-201ENST00000410832 272 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 AL513185.2-201ENST00000425543 193 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 AL138785.1-201ENST00000425821 331 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 AC004975.1-201ENST00000428733 208 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 AC016691.1-201ENST00000441321 413 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 RPL21P89-201ENST00000444021 467 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 CEACAMP6-201ENST00000452007 574 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 UBDP1-202ENST00000457888 382 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 snoU109.4-201ENST00000458953 143 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 RPS20P20-201ENST00000460498 340 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 RPL21P129-201ENST00000491732 478 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 FTH1P21-201ENST00000512179 511 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 AC017037.2-201ENST00000513850 890 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 RNA5SP401-201ENST00000515920 127 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 RNA5SP497-201ENST00000516081 97 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 SNORA40.12-201ENST00000516329 111 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 RNU6-410P-201ENST00000517006 107 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 RAB11AP2-201ENST00000545905 639 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 RPL21P12-201ENST00000559810 515 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 AC055876.1-202ENST00000567053 138 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 HNRNPCP4-201ENST00000571636 900 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 MIR6891-201ENST00000618788 93 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 AC138649.5-201ENST00000637456 137 ntBASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
AMBRA1Q9C0C7 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
AMBRA1Q9C0C7 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
AMBRA1Q9C0C7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
AMBRA1Q9C0C7 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.09□□□□□ -1.76
AMBRA1Q9C0C7 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
AMBRA1Q9C0C7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
AMBRA1Q9C0C7 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
AMBRA1Q9C0C7 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.09□□□□□ -1.76
AMBRA1Q9C0C7 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 AC022893.2-201ENST00000564832 3296 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 NOL8P1-201ENST00000508336 3529 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 RNU6-223P-201ENST00000362830 107 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms