Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC024153.1-201ENST00000603103 365 ntBASIC2□□□□□ -2.09
UPK3BQ9BT76 AC019159.1-201ENST00000605094 187 ntBASIC2□□□□□ -2.09
UPK3BQ9BT76 AL133507.1-201ENST00000605269 557 ntBASIC2□□□□□ -2.09
UPK3BQ9BT76 MIR8084-201ENST00000614105 89 ntBASIC2□□□□□ -2.09
UPK3BQ9BT76 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2□□□□□ -2.09
UPK3BQ9BT76 AC007318.2-201ENST00000620999 243 ntBASIC2□□□□□ -2.09
UPK3BQ9BT76 AC026634.1-201ENST00000634369 198 ntBASIC2□□□□□ -2.09
UPK3BQ9BT76 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2□□□□□ -2.09
UPK3BQ9BT76 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
UPK3BQ9BT76 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 RNU6-839P-201ENST00000363347 108 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 RNU6-1155P-201ENST00000363554 107 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 SNORA80A-201ENST00000363922 136 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 EIF4EBP2P3-201ENST00000403144 334 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 BX664727.1-201ENST00000416024 466 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 HMGN2P30-201ENST00000423237 256 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 SUMO1P4-201ENST00000429430 302 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 RPS20P5-201ENST00000434808 360 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 RPS24P13-201ENST00000442520 397 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 RAC1P7-201ENST00000445367 377 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 Z82190.1-201ENST00000454534 490 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AC008379.1-201ENST00000463655 464 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 RPS29P26-201ENST00000477483 171 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AC103975.1-201ENST00000482506 483 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 VN1R104P-201ENST00000505115 1009 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AC091860.1-201ENST00000505723 432 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AC121161.1-201ENST00000510606 652 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 RAC1P5-201ENST00000512182 576 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 SNORA31.15-201ENST00000516771 132 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AC087272.1-201ENST00000523624 533 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AP000867.2-201ENST00000532468 320 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 ELOCP31-201ENST00000540463 467 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AC006518.2-201ENST00000542513 940 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AC034105.3-201ENST00000565294 442 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AL049779.4-201ENST00000604500 156 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AP003973.1-201ENST00000604639 691 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AL137843.1-201ENST00000605078 385 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 SNHG22-203ENST00000617833 660 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AC010297.1-201ENST00000623948 149 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AC006386.2-201ENST00000624491 75 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AC012005.1-201ENST00000624575 75 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 SCARNA15.3-201ENST00000626315 122 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 SCARNA4.1-201ENST00000628597 123 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AL137790.1-201ENST00000634283 177 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AL163152.1-201ENST00000642001 374 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 GABRG2-229ENST00000641017 3628 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC1.99□□□□□ -2.09
UPK3BQ9BT76 AC099654.7-201ENST00000635788 2127 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 TAB3P1-202ENST00000452645 1634 ntBASIC1.99□□□□□ -2.09
UPK3BQ9BT76 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
UPK3BQ9BT76 AC087359.1-201ENST00000508335 1740 ntBASIC1.98□□□□□ -2.09
UPK3BQ9BT76 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
UPK3BQ9BT76 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
UPK3BQ9BT76 Y_RNA.111-201ENST00000363248 100 ntBASIC1.98□□□□□ -2.09
UPK3BQ9BT76 SNORD21-201ENST00000383953 95 ntBASIC1.98□□□□□ -2.09
UPK3BQ9BT76 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
UPK3BQ9BT76 RNU6-882P-201ENST00000391025 103 ntBASIC1.98□□□□□ -2.09
UPK3BQ9BT76 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
UPK3BQ9BT76 RNU6-575P-201ENST00000411326 105 ntBASIC1.98□□□□□ -2.09
UPK3BQ9BT76 RPL7P8-201ENST00000411964 730 ntBASIC1.98□□□□□ -2.09
UPK3BQ9BT76 BOLA3P4-201ENST00000418151 400 ntBASIC1.98□□□□□ -2.09
UPK3BQ9BT76 MTCO3P1-205ENST00000422088 832 ntBASIC1.98□□□□□ -2.09
UPK3BQ9BT76 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.98□□□□□ -2.09
UPK3BQ9BT76 PSMA6P3-201ENST00000428242 164 ntBASIC1.98□□□□□ -2.09
UPK3BQ9BT76 NDUFB4P6-201ENST00000436819 366 ntBASIC1.98□□□□□ -2.09
UPK3BQ9BT76 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.98□□□□□ -2.09
UPK3BQ9BT76 AL162389.1-201ENST00000449233 177 ntBASIC1.98□□□□□ -2.09
UPK3BQ9BT76 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.98□□□□□ -2.09
UPK3BQ9BT76 NIPA2P5-201ENST00000452282 464 ntBASIC1.98□□□□□ -2.09
UPK3BQ9BT76 AC092798.1-201ENST00000458542 409 ntBASIC1.98□□□□□ -2.09
UPK3BQ9BT76 AC104164.3-201ENST00000467363 1258 ntBASIC1.98□□□□□ -2.09
UPK3BQ9BT76 AP000852.1-201ENST00000472460 573 ntBASIC1.98□□□□□ -2.09
UPK3BQ9BT76 AC090525.1-201ENST00000479116 478 ntBASIC1.98□□□□□ -2.09
UPK3BQ9BT76 AC013828.1-201ENST00000481845 158 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms