Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 AC093227.2-201ENST00000589357 285 ntBASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 AC009159.1-201ENST00000618386 642 ntBASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 AC048344.4-201ENST00000619744 527 ntBASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 AC022079.1-201ENST00000621546 602 ntBASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 PLCE1P1-201ENST00000622094 305 ntBASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
HERPUD2Q9BSE4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 RLIMP1-201ENST00000339626 1680 ntBASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 RNU1-18P-201ENST00000363062 164 ntBASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 RPL7P25-201ENST00000404151 721 ntBASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 RPL17P36-201ENST00000420302 549 ntBASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 AL353777.1-201ENST00000425552 326 ntBASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 AC017083.1-201ENST00000428093 483 ntBASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 NDUFB4P6-201ENST00000436819 366 ntBASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 AC099563.1-201ENST00000456086 418 ntBASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 AC092754.2-201ENST00000463506 460 ntBASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 AC020893.1-201ENST00000502452 580 ntBASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 CDC42P4-201ENST00000510507 563 ntBASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 SCARNA15.2-201ENST00000516409 127 ntBASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 DEFB108A-201ENST00000530110 222 ntBASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 MIR5697-201ENST00000578045 78 ntBASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 SDR42E1P2-201ENST00000614861 481 ntBASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 AC010133.1-201ENST00000615809 842 ntBASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 AC010733.2-201ENST00000589496 5702 ntBASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.04□□□□□ -1.76
HERPUD2Q9BSE4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 MTND4P4-201ENST00000439033 1366 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 Y_RNA.126-201ENST00000363382 111 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 RNU1-39P-201ENST00000383897 165 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 MIR591-201ENST00000385290 95 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 SNORA26.8-201ENST00000391306 124 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 PTMAP5-201ENST00000393073 333 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 RPS4XP3-201ENST00000398541 413 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 AL021407.1-201ENST00000404531 386 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 RPL21P65-201ENST00000406094 466 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 AC245054.1-201ENST00000420944 258 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 AC090960.1-201ENST00000421072 306 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 RPL21P109-201ENST00000422213 475 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 NDUFB4P7-201ENST00000423198 363 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 AL117339.2-201ENST00000430475 180 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 RPL7P28-201ENST00000437739 740 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 USP9YP12-201ENST00000450481 570 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 AL359385.1-201ENST00000456509 365 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 RN7SL93P-201ENST00000463035 293 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 AC084198.1-201ENST00000477747 402 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 TRBV12-2-201ENST00000489763 344 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 AC123904.3-201ENST00000547218 814 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 AC123904.2-201ENST00000548059 300 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 AC091516.1-201ENST00000549191 703 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 AC124947.2-202ENST00000552735 133 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 ZNF519P3-201ENST00000557158 1032 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 MIR4474-201ENST00000579189 78 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms