Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 AC100778.3-201ENST00000580060 1750 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 AL592182.3-201ENST00000642132 3304 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
TM9SF2Q99805 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
TM9SF2Q99805 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TM9SF2Q99805 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.81□□□□□ -1.64
TM9SF2Q99805 RN7SKP44-201ENST00000363602 316 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 RNU6-474P-201ENST00000384243 107 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 SNORA16.2-201ENST00000390991 127 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 SNORA75.4-201ENST00000391278 119 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TM9SF2Q99805 AL080315.1-201ENST00000406055 466 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.81□□□□□ -1.64
TM9SF2Q99805 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.81□□□□□ -1.64
TM9SF2Q99805 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.81□□□□□ -1.64
TM9SF2Q99805 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.81□□□□□ -1.64
TM9SF2Q99805 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.81□□□□□ -1.64
TM9SF2Q99805 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.81□□□□□ -1.64
TM9SF2Q99805 TDGF1P1-201ENST00000445734 527 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 AL359073.1-201ENST00000448036 403 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 AL162388.1-201ENST00000450912 352 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 Y_RNA.639-201ENST00000458981 102 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 RNU6-953P-201ENST00000459154 107 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 Y_RNA.631-201ENST00000459607 101 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 RN7SL610P-201ENST00000463845 291 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 AC092754.1-201ENST00000472975 479 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 AP002812.1-201ENST00000495378 474 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.81□□□□□ -1.64
TM9SF2Q99805 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.81□□□□□ -1.64
TM9SF2Q99805 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.81□□□□□ -1.64
TM9SF2Q99805 AP006245.2-201ENST00000522004 300 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 HMGN2P6-201ENST00000551091 273 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 MIR3941-201ENST00000582572 103 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TM9SF2Q99805 AC023043.2-201ENST00000589678 1026 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 AC069307.1-201ENST00000602820 447 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 AC009597.2-201ENST00000604659 592 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 AC124303.1-201ENST00000605703 360 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 AC244107.2-201ENST00000611773 76 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 RPSAP73-201ENST00000614820 330 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.81□□□□□ -1.64
TM9SF2Q99805 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.81□□□□□ -1.64
TM9SF2Q99805 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TM9SF2Q99805 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.81□□□□□ -1.64
TM9SF2Q99805 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 MTCO1P12-201ENST00000414273 1543 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TM9SF2Q99805 AP001273.1-201ENST00000624493 3152 ntBASIC4.81□□□□□ -1.64
TM9SF2Q99805 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TM9SF2Q99805 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TM9SF2Q99805 AC109780.1-201ENST00000451768 1344 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TM9SF2Q99805 AC104118.1-201ENST00000607625 1589 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 Y_RNA.212-201ENST00000364177 102 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TM9SF2Q99805 Y_RNA.445-201ENST00000384168 102 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 RNU6-434P-201ENST00000384376 107 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 MIR606-201ENST00000384851 96 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 HSPE1P8-201ENST00000406997 288 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 RN7SKP213-201ENST00000410746 298 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TM9SF2Q99805 RPL7P10-201ENST00000417407 739 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.8□□□□□ -1.64
TM9SF2Q99805 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.8□□□□□ -1.64
TM9SF2Q99805 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.8□□□□□ -1.64
TM9SF2Q99805 AL591212.2-201ENST00000433923 257 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 FABP5P14-201ENST00000437273 393 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.8□□□□□ -1.64
TM9SF2Q99805 CYCSP24-201ENST00000445119 316 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.8□□□□□ -1.64
TM9SF2Q99805 RNU7-167P-201ENST00000459160 62 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 AC130509.1-201ENST00000464158 433 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 AC005532.2-201ENST00000467154 373 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 RN7SL222P-201ENST00000476452 299 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.8□□□□□ -1.64
TM9SF2Q99805 VN1R104P-201ENST00000505115 1009 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 SNORA31.22-201ENST00000517204 135 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.8□□□□□ -1.64
TM9SF2Q99805 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.8□□□□□ -1.64
TM9SF2Q99805 ERHP1-201ENST00000523006 310 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.8□□□□□ -1.64
TM9SF2Q99805 AC090115.3-201ENST00000553218 849 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 AL163153.1-201ENST00000554223 283 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.8□□□□□ -1.64
TM9SF2Q99805 AC006504.6-201ENST00000590142 199 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.8□□□□□ -1.64
TM9SF2Q99805 AL080274.1-201ENST00000605565 220 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 AC040896.1-201ENST00000613819 479 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 AL353748.2-201ENST00000622148 471 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 MTND5P42-201ENST00000637720 498 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 AC008013.2-202ENST00000637965 364 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TM9SF2Q99805 AC126323.6-202ENST00000568092 3511 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TM9SF2Q99805 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TM9SF2Q99805 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TM9SF2Q99805 OR14L1P-202ENST00000641545 3009 ntBASIC4.8□□□□□ -1.64
TM9SF2Q99805 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.8□□□□□ -1.64
TM9SF2Q99805 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.8□□□□□ -1.64
TM9SF2Q99805 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms