Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC068587.2-201ENST00000478386 781 ntBASIC3.82□□□□□ -1.8
NEK1Q96PY6 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NEK1Q96PY6 AC105185.1-201ENST00000518705 535 ntBASIC3.82□□□□□ -1.8
NEK1Q96PY6 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.82□□□□□ -1.8
NEK1Q96PY6 AP004371.1-201ENST00000525240 214 ntBASIC3.82□□□□□ -1.8
NEK1Q96PY6 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
NEK1Q96PY6 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.82□□□□□ -1.8
NEK1Q96PY6 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NEK1Q96PY6 UBE2NP1-201ENST00000545592 458 ntBASIC3.82□□□□□ -1.8
NEK1Q96PY6 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.82□□□□□ -1.8
NEK1Q96PY6 AC009094.1-201ENST00000564443 426 ntBASIC3.82□□□□□ -1.8
NEK1Q96PY6 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.82□□□□□ -1.8
NEK1Q96PY6 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.82□□□□□ -1.8
NEK1Q96PY6 MIR2682-201ENST00000580305 110 ntBASIC3.82□□□□□ -1.8
NEK1Q96PY6 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.82□□□□□ -1.8
NEK1Q96PY6 AC012493.2-201ENST00000595083 291 ntBASIC3.82□□□□□ -1.8
NEK1Q96PY6 NIFKP6-201ENST00000598115 845 ntBASIC3.82□□□□□ -1.8
NEK1Q96PY6 CKS1BP3-201ENST00000600888 237 ntBASIC3.82□□□□□ -1.8
NEK1Q96PY6 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.82□□□□□ -1.8
NEK1Q96PY6 AL139344.1-201ENST00000605228 195 ntBASIC3.82□□□□□ -1.8
NEK1Q96PY6 AC091304.6-201ENST00000619761 202 ntBASIC3.82□□□□□ -1.8
NEK1Q96PY6 AL607023.1-201ENST00000620045 248 ntBASIC3.82□□□□□ -1.8
NEK1Q96PY6 MIR6852-201ENST00000621699 66 ntBASIC3.82□□□□□ -1.8
NEK1Q96PY6 AC091903.1-201ENST00000624322 454 ntBASIC3.82□□□□□ -1.8
NEK1Q96PY6 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NEK1Q96PY6 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.82□□□□□ -1.8
NEK1Q96PY6 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
NEK1Q96PY6 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NEK1Q96PY6 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NEK1Q96PY6 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NEK1Q96PY6 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
NEK1Q96PY6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
NEK1Q96PY6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
NEK1Q96PY6 NUP58P1-201ENST00000502546 1738 ntBASIC3.81□□□□□ -1.8
NEK1Q96PY6 AF117829.1-206ENST00000621883 3802 ntBASIC3.81□□□□□ -1.8
NEK1Q96PY6 ZNF542P-204ENST00000482727 1305 ntBASIC3.81□□□□□ -1.8
NEK1Q96PY6 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NEK1Q96PY6 SNORA4.1-201ENST00000364263 144 ntBASIC3.81□□□□□ -1.8
NEK1Q96PY6 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NEK1Q96PY6 RNU6-821P-201ENST00000390995 107 ntBASIC3.81□□□□□ -1.8
NEK1Q96PY6 U3.26-201ENST00000391236 204 ntBASIC3.81□□□□□ -1.8
NEK1Q96PY6 AF228730.1-201ENST00000397972 663 ntBASIC3.81□□□□□ -1.8
NEK1Q96PY6 AL122016.1-201ENST00000403365 367 ntBASIC3.81□□□□□ -1.8
NEK1Q96PY6 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.81□□□□□ -1.8
NEK1Q96PY6 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.81□□□□□ -1.8
NEK1Q96PY6 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.81□□□□□ -1.8
NEK1Q96PY6 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.81□□□□□ -1.8
NEK1Q96PY6 VDAC1P3-201ENST00000434069 851 ntBASIC3.81□□□□□ -1.8
NEK1Q96PY6 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.81□□□□□ -1.8
NEK1Q96PY6 RPL23AP74-201ENST00000437246 471 ntBASIC3.81□□□□□ -1.8
NEK1Q96PY6 AL354941.1-201ENST00000438600 464 ntBASIC3.81□□□□□ -1.8
NEK1Q96PY6 AL008629.1-201ENST00000438615 184 ntBASIC3.81□□□□□ -1.8
NEK1Q96PY6 MTCYBP34-201ENST00000439552 670 ntBASIC3.81□□□□□ -1.8
NEK1Q96PY6 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.81□□□□□ -1.8
NEK1Q96PY6 RPS20P24-201ENST00000457473 361 ntBASIC3.81□□□□□ -1.8
NEK1Q96PY6 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.81□□□□□ -1.8
NEK1Q96PY6 RPL7P23-201ENST00000493874 747 ntBASIC3.81□□□□□ -1.8
NEK1Q96PY6 AC114981.1-201ENST00000503897 678 ntBASIC3.81□□□□□ -1.8
NEK1Q96PY6 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.81□□□□□ -1.8
NEK1Q96PY6 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.81□□□□□ -1.8
NEK1Q96PY6 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
NEK1Q96PY6 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.81□□□□□ -1.8
NEK1Q96PY6 ELOCP32-201ENST00000548625 324 ntBASIC3.81□□□□□ -1.8
NEK1Q96PY6 AL163153.1-201ENST00000554223 283 ntBASIC3.81□□□□□ -1.8
NEK1Q96PY6 HSPE1P3-201ENST00000559254 309 ntBASIC3.81□□□□□ -1.8
NEK1Q96PY6 AC090888.2-201ENST00000559765 1144 ntBASIC3.81□□□□□ -1.8
NEK1Q96PY6 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.81□□□□□ -1.8
NEK1Q96PY6 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.81□□□□□ -1.8
NEK1Q96PY6 YPEL5P2-201ENST00000605553 359 ntBASIC3.81□□□□□ -1.8
NEK1Q96PY6 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NEK1Q96PY6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.81□□□□□ -1.8
NEK1Q96PY6 MTND2P41-201ENST00000637599 773 ntBASIC3.81□□□□□ -1.8
NEK1Q96PY6 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.8□□□□□ -1.8
NEK1Q96PY6 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NEK1Q96PY6 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NEK1Q96PY6 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.8□□□□□ -1.8
NEK1Q96PY6 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.8□□□□□ -1.8
NEK1Q96PY6 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.8□□□□□ -1.8
NEK1Q96PY6 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
NEK1Q96PY6 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NEK1Q96PY6 RNU6-989P-201ENST00000362756 107 ntBASIC3.8□□□□□ -1.8
NEK1Q96PY6 RNA5SP383-201ENST00000362934 120 ntBASIC3.8□□□□□ -1.8
NEK1Q96PY6 SNORA48.5-201ENST00000391143 135 ntBASIC3.8□□□□□ -1.8
NEK1Q96PY6 AC119751.3-201ENST00000399720 670 ntBASIC3.8□□□□□ -1.8
NEK1Q96PY6 AL512649.1-201ENST00000428997 581 ntBASIC3.8□□□□□ -1.8
NEK1Q96PY6 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.8□□□□□ -1.8
NEK1Q96PY6 USP9YP34-201ENST00000453983 808 ntBASIC3.8□□□□□ -1.8
NEK1Q96PY6 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.8□□□□□ -1.8
NEK1Q96PY6 AL109741.2-201ENST00000455561 343 ntBASIC3.8□□□□□ -1.8
NEK1Q96PY6 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.8□□□□□ -1.8
NEK1Q96PY6 AC010468.1-201ENST00000461022 817 ntBASIC3.8□□□□□ -1.8
NEK1Q96PY6 AC097493.1-201ENST00000463958 372 ntBASIC3.8□□□□□ -1.8
NEK1Q96PY6 AC004263.1-201ENST00000479327 332 ntBASIC3.8□□□□□ -1.8
NEK1Q96PY6 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.8□□□□□ -1.8
NEK1Q96PY6 AC010265.1-201ENST00000513509 211 ntBASIC3.8□□□□□ -1.8
NEK1Q96PY6 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.8□□□□□ -1.8
NEK1Q96PY6 DEFB131D-201ENST00000526803 184 ntBASIC3.8□□□□□ -1.8
NEK1Q96PY6 OR4P1P-201ENST00000530808 1136 ntBASIC3.8□□□□□ -1.8
NEK1Q96PY6 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.8□□□□□ -1.8
NEK1Q96PY6 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms