Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
AP1S3Q96PC3 HSPE1P11-201ENST00000339579 310 ntBASIC1.74□□□□□ -2.13
AP1S3Q96PC3 MIR421-201ENST00000365696 85 ntBASIC1.74□□□□□ -2.13
AP1S3Q96PC3 RNU6-730P-201ENST00000383954 104 ntBASIC1.74□□□□□ -2.13
AP1S3Q96PC3 SNORA44-201ENST00000384584 132 ntBASIC1.74□□□□□ -2.13
AP1S3Q96PC3 SNORA46.1-201ENST00000391069 153 ntBASIC1.74□□□□□ -2.13
AP1S3Q96PC3 MTND4LP20-201ENST00000402379 270 ntBASIC1.74□□□□□ -2.13
AP1S3Q96PC3 RN7SKP27-201ENST00000410684 333 ntBASIC1.74□□□□□ -2.13
AP1S3Q96PC3 HMGB3P2-201ENST00000411913 584 ntBASIC1.74□□□□□ -2.13
AP1S3Q96PC3 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.74□□□□□ -2.13
AP1S3Q96PC3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.74□□□□□ -2.13
AP1S3Q96PC3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.74□□□□□ -2.13
AP1S3Q96PC3 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.74□□□□□ -2.13
AP1S3Q96PC3 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.74□□□□□ -2.13
AP1S3Q96PC3 AC233982.1-201ENST00000451247 436 ntBASIC1.74□□□□□ -2.13
AP1S3Q96PC3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.74□□□□□ -2.13
AP1S3Q96PC3 AC109486.1-201ENST00000486833 374 ntBASIC1.74□□□□□ -2.13
AP1S3Q96PC3 MTCYBP17-201ENST00000503579 789 ntBASIC1.74□□□□□ -2.13
AP1S3Q96PC3 COL6A4P2-205ENST00000509855 506 ntBASIC1.74□□□□□ -2.13
AP1S3Q96PC3 RN7SKP24-201ENST00000515888 284 ntBASIC1.74□□□□□ -2.13
AP1S3Q96PC3 OR4V1P-201ENST00000525394 1140 ntBASIC1.74□□□□□ -2.13
AP1S3Q96PC3 ATP5F1P5-201ENST00000526403 760 ntBASIC1.74□□□□□ -2.13
AP1S3Q96PC3 AC118942.1-201ENST00000529674 1035 ntBASIC1.74□□□□□ -2.13
AP1S3Q96PC3 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.74□□□□□ -2.13
AP1S3Q96PC3 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.74□□□□□ -2.13
AP1S3Q96PC3 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.74□□□□□ -2.13
AP1S3Q96PC3 AC008749.1-201ENST00000597650 306 ntBASIC1.74□□□□□ -2.13
AP1S3Q96PC3 AC079089.3-201ENST00000603094 673 ntBASIC1.74□□□□□ -2.13
AP1S3Q96PC3 AC103710.4-201ENST00000609301 899 ntBASIC1.74□□□□□ -2.13
AP1S3Q96PC3 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.74□□□□□ -2.13
AP1S3Q96PC3 AL162373.1-201ENST00000620433 407 ntBASIC1.74□□□□□ -2.13
AP1S3Q96PC3 AP006248.3-201ENST00000623580 594 ntBASIC1.74□□□□□ -2.13
AP1S3Q96PC3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.74□□□□□ -2.13
AP1S3Q96PC3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
AP1S3Q96PC3 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.74□□□□□ -2.13
AP1S3Q96PC3 MFSD8-245ENST00000641743 948 ntBASIC1.74□□□□□ -2.13
AP1S3Q96PC3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.74□□□□□ -2.13
AP1S3Q96PC3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.74□□□□□ -2.13
AP1S3Q96PC3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.74□□□□□ -2.13
AP1S3Q96PC3 MTND4P35-201ENST00000604257 1375 ntBASIC1.73□□□□□ -2.13
AP1S3Q96PC3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
AP1S3Q96PC3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.73□□□□□ -2.13
AP1S3Q96PC3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
AP1S3Q96PC3 RNU1-105P-201ENST00000363470 161 ntBASIC1.73□□□□□ -2.13
AP1S3Q96PC3 RNU6-270P-201ENST00000364131 105 ntBASIC1.73□□□□□ -2.13
AP1S3Q96PC3 SNORA11B-201ENST00000408175 129 ntBASIC1.73□□□□□ -2.13
AP1S3Q96PC3 NPM1P11-201ENST00000417106 855 ntBASIC1.73□□□□□ -2.13
AP1S3Q96PC3 RPL7P44-201ENST00000424827 742 ntBASIC1.73□□□□□ -2.13
AP1S3Q96PC3 ARL5AP4-201ENST00000430731 512 ntBASIC1.73□□□□□ -2.13
AP1S3Q96PC3 UBE2FP3-201ENST00000436366 524 ntBASIC1.73□□□□□ -2.13
AP1S3Q96PC3 ARPC3P1-201ENST00000437218 533 ntBASIC1.73□□□□□ -2.13
AP1S3Q96PC3 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.73□□□□□ -2.13
AP1S3Q96PC3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.73□□□□□ -2.13
AP1S3Q96PC3 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.73□□□□□ -2.13
AP1S3Q96PC3 RPL36AP51-201ENST00000487216 318 ntBASIC1.73□□□□□ -2.13
AP1S3Q96PC3 AC008413.1-201ENST00000511864 177 ntBASIC1.73□□□□□ -2.13
AP1S3Q96PC3 SETP12-201ENST00000514068 805 ntBASIC1.73□□□□□ -2.13
AP1S3Q96PC3 RNA5SP24-201ENST00000516478 95 ntBASIC1.73□□□□□ -2.13
AP1S3Q96PC3 C1DP5-201ENST00000525775 383 ntBASIC1.73□□□□□ -2.13
AP1S3Q96PC3 HMGB1P14-201ENST00000557424 591 ntBASIC1.73□□□□□ -2.13
AP1S3Q96PC3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.73□□□□□ -2.13
AP1S3Q96PC3 MIR3616-201ENST00000584070 92 ntBASIC1.73□□□□□ -2.13
AP1S3Q96PC3 AL513477.2-201ENST00000607858 568 ntBASIC1.73□□□□□ -2.13
AP1S3Q96PC3 AC005332.10-201ENST00000612725 619 ntBASIC1.73□□□□□ -2.13
AP1S3Q96PC3 uc_338.20-201ENST00000621563 178 ntBASIC1.73□□□□□ -2.13
AP1S3Q96PC3 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
AP1S3Q96PC3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.73□□□□□ -2.13
AP1S3Q96PC3 MIR203B-201ENST00000636080 86 ntBASIC1.73□□□□□ -2.13
AP1S3Q96PC3 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
AP1S3Q96PC3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
AP1S3Q96PC3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
AP1S3Q96PC3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 MIR21-201ENST00000362134 72 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 AL122016.1-201ENST00000403365 367 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 RPS3AP24-201ENST00000407896 734 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.72□□□□□ -2.13
AP1S3Q96PC3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.72□□□□□ -2.13
AP1S3Q96PC3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.72□□□□□ -2.13
AP1S3Q96PC3 AL358075.3-201ENST00000426289 226 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 MTATP6P11-201ENST00000428071 670 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 FO393419.3-201ENST00000428741 282 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 MYL8P-204ENST00000431574 518 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 AL451074.3-201ENST00000437709 472 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 MTCO3P17-201ENST00000443775 513 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.72□□□□□ -2.13
AP1S3Q96PC3 AP000936.2-201ENST00000447151 681 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 ANKRD26P4-201ENST00000455755 950 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 AC092798.1-201ENST00000458542 409 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 SNORD109B-201ENST00000458961 67 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 SNORD109A-201ENST00000459128 67 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 snoU13.28-201ENST00000459235 104 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.72□□□□□ -2.13
AP1S3Q96PC3 OR52A4P-202ENST00000481634 799 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 OR52A4P-203ENST00000498233 1014 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 PCNAP1-201ENST00000505363 709 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.72□□□□□ -2.13
AP1S3Q96PC3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.72□□□□□ -2.13
AP1S3Q96PC3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.72□□□□□ -2.13
AP1S3Q96PC3 AC034159.1-201ENST00000513885 583 ntBASIC1.72□□□□□ -2.13
AP1S3Q96PC3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms