Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 MTND2P19-201ENST00000449129 1012 ntBASIC2.43□□□□□ -2.02
CCDC42Q96M95 SNRPGP6-201ENST00000451124 220 ntBASIC2.43□□□□□ -2.02
CCDC42Q96M95 AC108938.1-201ENST00000451204 136 ntBASIC2.43□□□□□ -2.02
CCDC42Q96M95 AL109933.2-201ENST00000452651 260 ntBASIC2.43□□□□□ -2.02
CCDC42Q96M95 AC010099.1-201ENST00000455434 375 ntBASIC2.43□□□□□ -2.02
CCDC42Q96M95 RPS3P1-201ENST00000456781 192 ntBASIC2.43□□□□□ -2.02
CCDC42Q96M95 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.43□□□□□ -2.02
CCDC42Q96M95 GZMAP1-201ENST00000503054 631 ntBASIC2.43□□□□□ -2.02
CCDC42Q96M95 CBX3P3-201ENST00000508108 532 ntBASIC2.43□□□□□ -2.02
CCDC42Q96M95 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC42Q96M95 AC083923.1-201ENST00000523708 376 ntBASIC2.43□□□□□ -2.02
CCDC42Q96M95 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC42Q96M95 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC42Q96M95 AC012254.4-201ENST00000588843 273 ntBASIC2.43□□□□□ -2.02
CCDC42Q96M95 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.43□□□□□ -2.02
CCDC42Q96M95 AC245517.5-201ENST00000611529 162 ntBASIC2.43□□□□□ -2.02
CCDC42Q96M95 AC024595.1-201ENST00000623088 387 ntBASIC2.43□□□□□ -2.02
CCDC42Q96M95 AC006386.2-201ENST00000624491 75 ntBASIC2.43□□□□□ -2.02
CCDC42Q96M95 AC012005.1-201ENST00000624575 75 ntBASIC2.43□□□□□ -2.02
CCDC42Q96M95 AC092608.3-201ENST00000625017 386 ntBASIC2.43□□□□□ -2.02
CCDC42Q96M95 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC42Q96M95 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
CCDC42Q96M95 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
CCDC42Q96M95 AL049780.3-201ENST00000624612 1583 ntBASIC2.43□□□□□ -2.02
CCDC42Q96M95 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC42Q96M95 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC42Q96M95 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
CCDC42Q96M95 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC42Q96M95 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC42Q96M95 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CCDC42Q96M95 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC42Q96M95 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC42Q96M95 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC42Q96M95 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.42□□□□□ -2.02
CCDC42Q96M95 AC092427.1-202ENST00000430569 476 ntBASIC2.42□□□□□ -2.02
CCDC42Q96M95 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.42□□□□□ -2.02
CCDC42Q96M95 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC42Q96M95 AC018634.1-201ENST00000437554 401 ntBASIC2.42□□□□□ -2.02
CCDC42Q96M95 FABP5P3-201ENST00000437960 408 ntBASIC2.42□□□□□ -2.02
CCDC42Q96M95 OR6K5P-201ENST00000447050 945 ntBASIC2.42□□□□□ -2.02
CCDC42Q96M95 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC42Q96M95 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC42Q96M95 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC42Q96M95 AC004263.1-201ENST00000479327 332 ntBASIC2.42□□□□□ -2.02
CCDC42Q96M95 MTCO1P31-201ENST00000506355 492 ntBASIC2.42□□□□□ -2.02
CCDC42Q96M95 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC42Q96M95 RNA5SP356-201ENST00000515972 94 ntBASIC2.42□□□□□ -2.02
CCDC42Q96M95 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC42Q96M95 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC42Q96M95 MED28P6-201ENST00000558776 231 ntBASIC2.42□□□□□ -2.02
CCDC42Q96M95 LARP7P3-201ENST00000579888 337 ntBASIC2.42□□□□□ -2.02
CCDC42Q96M95 AC022387.2-201ENST00000604050 448 ntBASIC2.42□□□□□ -2.02
CCDC42Q96M95 AC013562.2-201ENST00000611632 603 ntBASIC2.42□□□□□ -2.02
CCDC42Q96M95 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC42Q96M95 AC009159.1-201ENST00000618386 642 ntBASIC2.42□□□□□ -2.02
CCDC42Q96M95 AC068880.5-201ENST00000624331 290 ntBASIC2.42□□□□□ -2.02
CCDC42Q96M95 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CCDC42Q96M95 CKAP2P1-201ENST00000555477 2049 ntBASIC2.42□□□□□ -2.02
CCDC42Q96M95 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.42□□□□□ -2.02
CCDC42Q96M95 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC42Q96M95 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC42Q96M95 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
CCDC42Q96M95 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC42Q96M95 TAS2R15P-201ENST00000390674 928 ntBASIC2.41□□□□□ -2.02
CCDC42Q96M95 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC42Q96M95 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC42Q96M95 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC42Q96M95 MORF4L1P7-201ENST00000426038 703 ntBASIC2.41□□□□□ -2.02
CCDC42Q96M95 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC42Q96M95 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC42Q96M95 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC42Q96M95 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC42Q96M95 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.41□□□□□ -2.02
CCDC42Q96M95 AC087272.1-201ENST00000523624 533 ntBASIC2.41□□□□□ -2.02
CCDC42Q96M95 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC42Q96M95 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC42Q96M95 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC42Q96M95 AC027104.1-201ENST00000563702 681 ntBASIC2.41□□□□□ -2.02
CCDC42Q96M95 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC42Q96M95 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC42Q96M95 AC103810.1-201ENST00000579873 453 ntBASIC2.41□□□□□ -2.02
CCDC42Q96M95 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC42Q96M95 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC42Q96M95 AC087359.1-201ENST00000508335 1740 ntBASIC2.41□□□□□ -2.02
CCDC42Q96M95 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
CCDC42Q96M95 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC42Q96M95 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC42Q96M95 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
CCDC42Q96M95 SNORA80A-201ENST00000363922 136 ntBASIC2.4□□□□□ -2.03
CCDC42Q96M95 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC42Q96M95 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.4□□□□□ -2.03
CCDC42Q96M95 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC42Q96M95 MTND1P33-201ENST00000446251 917 ntBASIC2.4□□□□□ -2.03
CCDC42Q96M95 AC104073.1-201ENST00000451988 151 ntBASIC2.4□□□□□ -2.03
CCDC42Q96M95 SETP6-201ENST00000479329 568 ntBASIC2.4□□□□□ -2.03
CCDC42Q96M95 RN7SL636P-201ENST00000497504 294 ntBASIC2.4□□□□□ -2.03
CCDC42Q96M95 MTCYBP20-201ENST00000524239 1129 ntBASIC2.4□□□□□ -2.03
CCDC42Q96M95 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC42Q96M95 EIF1AXP2-201ENST00000555940 413 ntBASIC2.4□□□□□ -2.03
CCDC42Q96M95 MIR6840-201ENST00000611937 71 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms