Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HLA-CQ95604 RNA5SP494-201ENST00000410653 129 ntBASIC5.99□□□□□ -1.45
HLA-CQ95604 TMEM167AP1-201ENST00000423409 219 ntBASIC5.99□□□□□ -1.45
HLA-CQ95604 AC108075.1-201ENST00000424692 529 ntBASIC5.99□□□□□ -1.45
HLA-CQ95604 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
HLA-CQ95604 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.99□□□□□ -1.45
HLA-CQ95604 RPS29P33-201ENST00000456717 146 ntBASIC5.99□□□□□ -1.45
HLA-CQ95604 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.99□□□□□ -1.45
HLA-CQ95604 RN7SL481P-201ENST00000477764 299 ntBASIC5.99□□□□□ -1.45
HLA-CQ95604 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.99□□□□□ -1.45
HLA-CQ95604 MRPL42P6-201ENST00000486397 371 ntBASIC5.99□□□□□ -1.45
HLA-CQ95604 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.99□□□□□ -1.45
HLA-CQ95604 MIR892C-201ENST00000516410 77 ntBASIC5.99□□□□□ -1.45
HLA-CQ95604 RNU6-840P-201ENST00000517275 65 ntBASIC5.99□□□□□ -1.45
HLA-CQ95604 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.99□□□□□ -1.45
HLA-CQ95604 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.99□□□□□ -1.45
HLA-CQ95604 AP000859.1-201ENST00000525536 307 ntBASIC5.99□□□□□ -1.45
HLA-CQ95604 AC087441.2-201ENST00000529141 262 ntBASIC5.99□□□□□ -1.45
HLA-CQ95604 AC022884.2-201ENST00000578535 580 ntBASIC5.99□□□□□ -1.45
HLA-CQ95604 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.99□□□□□ -1.45
HLA-CQ95604 AC000068.2-201ENST00000608816 460 ntBASIC5.99□□□□□ -1.45
HLA-CQ95604 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.99□□□□□ -1.45
HLA-CQ95604 AC034102.8-201ENST00000615146 484 ntBASIC5.99□□□□□ -1.45
HLA-CQ95604 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.99□□□□□ -1.45
HLA-CQ95604 U6.92-201ENST00000636464 89 ntBASIC5.99□□□□□ -1.45
HLA-CQ95604 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-CQ95604 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-CQ95604 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HLA-CQ95604 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HLA-CQ95604 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-CQ95604 AC007785.2-201ENST00000598627 1916 ntBASIC5.99□□□□□ -1.45
HLA-CQ95604 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-CQ95604 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-CQ95604 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-CQ95604 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
HLA-CQ95604 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-CQ95604 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.98□□□□□ -1.45
HLA-CQ95604 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-CQ95604 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
HLA-CQ95604 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC5.98□□□□□ -1.45
HLA-CQ95604 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.98□□□□□ -1.45
HLA-CQ95604 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-CQ95604 RNU6-1027P-201ENST00000383998 107 ntBASIC5.98□□□□□ -1.45
HLA-CQ95604 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.98□□□□□ -1.45
HLA-CQ95604 EI24P1-201ENST00000416584 867 ntBASIC5.98□□□□□ -1.45
HLA-CQ95604 AF186996.5-201ENST00000418098 904 ntBASIC5.98□□□□□ -1.45
HLA-CQ95604 RPS27AP12-201ENST00000429552 465 ntBASIC5.98□□□□□ -1.45
HLA-CQ95604 AL663074.2-201ENST00000440621 479 ntBASIC5.98□□□□□ -1.45
HLA-CQ95604 AL445433.1-201ENST00000457507 257 ntBASIC5.98□□□□□ -1.45
HLA-CQ95604 AC010469.2-201ENST00000496412 480 ntBASIC5.98□□□□□ -1.45
HLA-CQ95604 RNU6-1278P-201ENST00000516130 107 ntBASIC5.98□□□□□ -1.45
HLA-CQ95604 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-CQ95604 RPL10P14-201ENST00000565265 298 ntBASIC5.98□□□□□ -1.45
HLA-CQ95604 AC012616.1-201ENST00000600294 197 ntBASIC5.98□□□□□ -1.45
HLA-CQ95604 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.98□□□□□ -1.45
HLA-CQ95604 AC009318.2-201ENST00000610917 651 ntBASIC5.98□□□□□ -1.45
HLA-CQ95604 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.98□□□□□ -1.45
HLA-CQ95604 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-CQ95604 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-CQ95604 AC073869.8-201ENST00000641806 335 ntBASIC5.98□□□□□ -1.45
HLA-CQ95604 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-CQ95604 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-CQ95604 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-CQ95604 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-CQ95604 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
HLA-CQ95604 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-CQ95604 AP001284.1-201ENST00000528393 2118 ntBASIC5.98□□□□□ -1.45
HLA-CQ95604 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
HLA-CQ95604 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.97□□□□□ -1.45
HLA-CQ95604 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-CQ95604 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.97□□□□□ -1.45
HLA-CQ95604 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.97□□□□□ -1.45
HLA-CQ95604 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-CQ95604 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HLA-CQ95604 RNA5SP335-201ENST00000363817 110 ntBASIC5.97□□□□□ -1.45
HLA-CQ95604 RNU6-81P-201ENST00000365608 104 ntBASIC5.97□□□□□ -1.45
HLA-CQ95604 SNORA67-201ENST00000384423 137 ntBASIC5.97□□□□□ -1.45
HLA-CQ95604 Y_RNA.541-201ENST00000384640 113 ntBASIC5.97□□□□□ -1.45
HLA-CQ95604 RNU6-1179P-201ENST00000384667 107 ntBASIC5.97□□□□□ -1.45
HLA-CQ95604 MIR521-1-201ENST00000384902 87 ntBASIC5.97□□□□□ -1.45
HLA-CQ95604 RPL21P75-201ENST00000396599 483 ntBASIC5.97□□□□□ -1.45
HLA-CQ95604 MIR190B-201ENST00000401119 79 ntBASIC5.97□□□□□ -1.45
HLA-CQ95604 RPL21P28-201ENST00000401418 483 ntBASIC5.97□□□□□ -1.45
HLA-CQ95604 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.97□□□□□ -1.45
HLA-CQ95604 MYL6P5-201ENST00000412707 459 ntBASIC5.97□□□□□ -1.45
HLA-CQ95604 AL590556.1-201ENST00000423231 483 ntBASIC5.97□□□□□ -1.45
HLA-CQ95604 DNAJC19P7-201ENST00000428811 344 ntBASIC5.97□□□□□ -1.45
HLA-CQ95604 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.97□□□□□ -1.45
HLA-CQ95604 RPL21P11-201ENST00000461458 483 ntBASIC5.97□□□□□ -1.45
HLA-CQ95604 RPL21P39-201ENST00000463605 483 ntBASIC5.97□□□□□ -1.45
HLA-CQ95604 AC132942.1-201ENST00000486753 483 ntBASIC5.97□□□□□ -1.45
HLA-CQ95604 AC093591.1-201ENST00000491435 481 ntBASIC5.97□□□□□ -1.45
HLA-CQ95604 RPL21P16-201ENST00000495531 483 ntBASIC5.97□□□□□ -1.45
HLA-CQ95604 RAB9BP1-201ENST00000519581 626 ntBASIC5.97□□□□□ -1.45
HLA-CQ95604 AC024405.2-202ENST00000532731 184 ntBASIC5.97□□□□□ -1.45
HLA-CQ95604 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-CQ95604 AC104581.2-201ENST00000572227 430 ntBASIC5.97□□□□□ -1.45
HLA-CQ95604 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-CQ95604 AP001485.1-201ENST00000604799 199 ntBASIC5.97□□□□□ -1.45
HLA-CQ95604 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms