Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.12□□□□□ -1.59
BRF1Q92994 AL352979.3-201ENST00000553515 247 ntBASIC5.12□□□□□ -1.59
BRF1Q92994 MIR4716-201ENST00000579628 84 ntBASIC5.12□□□□□ -1.59
BRF1Q92994 RN7SL176P-201ENST00000580352 264 ntBASIC5.12□□□□□ -1.59
BRF1Q92994 MIR4715-201ENST00000584117 79 ntBASIC5.12□□□□□ -1.59
BRF1Q92994 AC020910.2-201ENST00000603635 610 ntBASIC5.12□□□□□ -1.59
BRF1Q92994 AP000346.3-201ENST00000622821 210 ntBASIC5.12□□□□□ -1.59
BRF1Q92994 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
BRF1Q92994 AC009951.1-201ENST00000623674 2614 ntBASIC5.12□□□□□ -1.59
BRF1Q92994 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
BRF1Q92994 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
BRF1Q92994 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
BRF1Q92994 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.12□□□□□ -1.59
BRF1Q92994 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
BRF1Q92994 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
BRF1Q92994 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
BRF1Q92994 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.11□□□□□ -1.59
BRF1Q92994 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
BRF1Q92994 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.11□□□□□ -1.59
BRF1Q92994 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
BRF1Q92994 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
BRF1Q92994 RNU5E-8P-201ENST00000363502 116 ntBASIC5.11□□□□□ -1.59
BRF1Q92994 MIR514A2-201ENST00000385131 88 ntBASIC5.11□□□□□ -1.59
BRF1Q92994 MIR514A3-201ENST00000385132 88 ntBASIC5.11□□□□□ -1.59
BRF1Q92994 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
BRF1Q92994 SNORD66.1-201ENST00000391230 76 ntBASIC5.11□□□□□ -1.59
BRF1Q92994 AL356967.1-201ENST00000406305 431 ntBASIC5.11□□□□□ -1.59
BRF1Q92994 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC5.11□□□□□ -1.59
BRF1Q92994 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
BRF1Q92994 DUTP6-201ENST00000425573 462 ntBASIC5.11□□□□□ -1.59
BRF1Q92994 OR4K11P-201ENST00000431829 904 ntBASIC5.11□□□□□ -1.59
BRF1Q92994 AL591623.2-201ENST00000449978 222 ntBASIC5.11□□□□□ -1.59
BRF1Q92994 AC006512.1-201ENST00000468816 291 ntBASIC5.11□□□□□ -1.59
BRF1Q92994 HMGB1P21-201ENST00000502313 581 ntBASIC5.11□□□□□ -1.59
BRF1Q92994 AC020893.1-201ENST00000502452 580 ntBASIC5.11□□□□□ -1.59
BRF1Q92994 COX7A2P2-201ENST00000505291 250 ntBASIC5.11□□□□□ -1.59
BRF1Q92994 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.11□□□□□ -1.59
BRF1Q92994 RN7SKP82-201ENST00000516786 223 ntBASIC5.11□□□□□ -1.59
BRF1Q92994 BTF3P12-201ENST00000519620 469 ntBASIC5.11□□□□□ -1.59
BRF1Q92994 AP005639.2-201ENST00000527592 928 ntBASIC5.11□□□□□ -1.59
BRF1Q92994 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.11□□□□□ -1.59
BRF1Q92994 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.11□□□□□ -1.59
BRF1Q92994 MTND6P33-201ENST00000571794 183 ntBASIC5.11□□□□□ -1.59
BRF1Q92994 OR4K8P-201ENST00000578842 1048 ntBASIC5.11□□□□□ -1.59
BRF1Q92994 COX6CP3-201ENST00000580869 223 ntBASIC5.11□□□□□ -1.59
BRF1Q92994 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
BRF1Q92994 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.11□□□□□ -1.59
BRF1Q92994 AC234771.5-201ENST00000600161 514 ntBASIC5.11□□□□□ -1.59
BRF1Q92994 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.11□□□□□ -1.59
BRF1Q92994 AC093913.1-201ENST00000614178 329 ntBASIC5.11□□□□□ -1.59
BRF1Q92994 AL021997.2-201ENST00000615674 271 ntBASIC5.11□□□□□ -1.59
BRF1Q92994 AC002550.2-201ENST00000621246 394 ntBASIC5.11□□□□□ -1.59
BRF1Q92994 AC244100.1-202ENST00000621554 382 ntBASIC5.11□□□□□ -1.59
BRF1Q92994 AC015908.5-201ENST00000623289 343 ntBASIC5.11□□□□□ -1.59
BRF1Q92994 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.11□□□□□ -1.59
BRF1Q92994 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
BRF1Q92994 IQCB2P-201ENST00000401788 1633 ntBASIC5.11□□□□□ -1.59
BRF1Q92994 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.11□□□□□ -1.59
BRF1Q92994 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.11□□□□□ -1.59
BRF1Q92994 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
BRF1Q92994 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
BRF1Q92994 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
BRF1Q92994 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
BRF1Q92994 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
BRF1Q92994 RNU1-15P-201ENST00000353977 144 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 Y_RNA.67-201ENST00000362870 100 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 Y_RNA.231-201ENST00000364358 102 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 Y_RNA.394-201ENST00000383942 103 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 Y_RNA.419-201ENST00000384041 102 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 RNU6-39P-201ENST00000384344 107 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 RNU6-146P-201ENST00000384602 108 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 ENSAP1-201ENST00000392855 326 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.1□□□□□ -1.59
BRF1Q92994 MIR937-201ENST00000401271 86 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
BRF1Q92994 HMGN1P24-201ENST00000412282 298 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 RPL26P29-201ENST00000415623 438 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 RPS15AP40-201ENST00000419621 391 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.1□□□□□ -1.59
BRF1Q92994 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.1□□□□□ -1.59
BRF1Q92994 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.1□□□□□ -1.59
BRF1Q92994 MTCYBP8-201ENST00000422855 651 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 MED13P1-201ENST00000428342 171 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC5.1□□□□□ -1.59
BRF1Q92994 ERLEC1P1-201ENST00000433806 578 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 AL356276.2-201ENST00000435919 558 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
BRF1Q92994 AL138799.3-201ENST00000438968 350 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 RPL23AP52-201ENST00000439311 478 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 RAC1P7-201ENST00000445367 377 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 AL589765.3-201ENST00000446084 462 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 ABCF2P2-201ENST00000450549 296 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 ASNSP3-201ENST00000451989 1306 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 MTND3P16-201ENST00000452205 344 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 AL121877.1-201ENST00000453704 622 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 RNU6-329P-201ENST00000459618 107 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 RPS26P28-201ENST00000470806 348 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 RPS29P22-201ENST00000472363 168 ntBASIC5.1□□□□□ -1.59
BRF1Q92994 AC126389.1-201ENST00000477436 290 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms