Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 SNORA50A-202ENST00000629536 136 ntBASIC2.94□□□□□ -1.94
TOPBP1Q92547 AC092447.7-201ENST00000422212 1621 ntBASIC2.94□□□□□ -1.94
TOPBP1Q92547 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
TOPBP1Q92547 RNA5SP325-201ENST00000363756 130 ntBASIC2.93□□□□□ -1.94
TOPBP1Q92547 U8.9-201ENST00000365667 134 ntBASIC2.93□□□□□ -1.94
TOPBP1Q92547 HMGB1P13-201ENST00000406019 642 ntBASIC2.93□□□□□ -1.94
TOPBP1Q92547 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.93□□□□□ -1.94
TOPBP1Q92547 RPL39P40-201ENST00000445481 146 ntBASIC2.93□□□□□ -1.94
TOPBP1Q92547 SSXP1-201ENST00000453640 473 ntBASIC2.93□□□□□ -1.94
TOPBP1Q92547 AC090453.1-201ENST00000495560 436 ntBASIC2.93□□□□□ -1.94
TOPBP1Q92547 AC092436.3-201ENST00000511788 257 ntBASIC2.93□□□□□ -1.94
TOPBP1Q92547 AC012213.4-201ENST00000606457 354 ntBASIC2.93□□□□□ -1.94
TOPBP1Q92547 MIR6779-201ENST00000617283 64 ntBASIC2.93□□□□□ -1.94
TOPBP1Q92547 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC2.93□□□□□ -1.94
TOPBP1Q92547 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.93□□□□□ -1.94
TOPBP1Q92547 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
TOPBP1Q92547 RNA5SP27-201ENST00000363839 119 ntBASIC2.93□□□□□ -1.94
TOPBP1Q92547 RNU6-707P-201ENST00000364647 95 ntBASIC2.93□□□□□ -1.94
TOPBP1Q92547 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
TOPBP1Q92547 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.93□□□□□ -1.94
TOPBP1Q92547 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.93□□□□□ -1.94
TOPBP1Q92547 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.93□□□□□ -1.94
TOPBP1Q92547 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.93□□□□□ -1.94
TOPBP1Q92547 AC113398.2-201ENST00000507630 558 ntBASIC2.93□□□□□ -1.94
TOPBP1Q92547 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.93□□□□□ -1.94
TOPBP1Q92547 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.93□□□□□ -1.94
TOPBP1Q92547 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
TOPBP1Q92547 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.93□□□□□ -1.94
TOPBP1Q92547 MIR502-201ENST00000606349 86 ntBASIC2.93□□□□□ -1.94
TOPBP1Q92547 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
TOPBP1Q92547 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TOPBP1Q92547 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.92□□□□□ -1.94
TOPBP1Q92547 TRGV6-201ENST00000417928 299 ntBASIC2.92□□□□□ -1.94
TOPBP1Q92547 MTCYBP31-201ENST00000438855 1122 ntBASIC2.92□□□□□ -1.94
TOPBP1Q92547 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.92□□□□□ -1.94
TOPBP1Q92547 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC2.92□□□□□ -1.94
TOPBP1Q92547 RNA5SP402-201ENST00000517148 110 ntBASIC2.92□□□□□ -1.94
TOPBP1Q92547 AC103810.1-201ENST00000579873 453 ntBASIC2.92□□□□□ -1.94
TOPBP1Q92547 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.92□□□□□ -1.94
TOPBP1Q92547 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TOPBP1Q92547 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TOPBP1Q92547 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
TOPBP1Q92547 AP001148.1-201ENST00000624124 2359 ntBASIC2.91□□□□□ -1.94
TOPBP1Q92547 AC000367.1-201ENST00000452711 1766 ntBASIC2.91□□□□□ -1.94
TOPBP1Q92547 Z98749.2-208ENST00000381646 500 ntBASIC2.91□□□□□ -1.94
TOPBP1Q92547 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.91□□□□□ -1.94
TOPBP1Q92547 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.91□□□□□ -1.94
TOPBP1Q92547 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.91□□□□□ -1.94
TOPBP1Q92547 AL353093.1-201ENST00000441292 436 ntBASIC2.91□□□□□ -1.94
TOPBP1Q92547 AL137159.1-201ENST00000452808 512 ntBASIC2.91□□□□□ -1.94
TOPBP1Q92547 SNRPFP4-201ENST00000456366 242 ntBASIC2.91□□□□□ -1.94
TOPBP1Q92547 AC008571.1-201ENST00000467232 300 ntBASIC2.91□□□□□ -1.94
TOPBP1Q92547 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.91□□□□□ -1.94
TOPBP1Q92547 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.91□□□□□ -1.94
TOPBP1Q92547 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC2.91□□□□□ -1.94
TOPBP1Q92547 AC019159.1-201ENST00000605094 187 ntBASIC2.91□□□□□ -1.94
TOPBP1Q92547 API5P2-201ENST00000397055 1498 ntBASIC2.91□□□□□ -1.94
TOPBP1Q92547 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
TOPBP1Q92547 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.94
TOPBP1Q92547 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
TOPBP1Q92547 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
TOPBP1Q92547 UBE2L2-201ENST00000254302 429 ntBASIC2.9□□□□□ -1.95
TOPBP1Q92547 AL391987.6-201ENST00000305671 199 ntBASIC2.9□□□□□ -1.95
TOPBP1Q92547 FNDC3CP-201ENST00000420795 1155 ntBASIC2.9□□□□□ -1.95
TOPBP1Q92547 AC009965.2-201ENST00000425328 970 ntBASIC2.9□□□□□ -1.95
TOPBP1Q92547 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.9□□□□□ -1.95
TOPBP1Q92547 PTP4A1P6-201ENST00000531034 478 ntBASIC2.9□□□□□ -1.95
TOPBP1Q92547 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.9□□□□□ -1.95
TOPBP1Q92547 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.9□□□□□ -1.95
TOPBP1Q92547 AP005136.1-201ENST00000579765 429 ntBASIC2.9□□□□□ -1.95
TOPBP1Q92547 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.9□□□□□ -1.95
TOPBP1Q92547 XIST_intron.1-201ENST00000619444 68 ntBASIC2.9□□□□□ -1.95
TOPBP1Q92547 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
TOPBP1Q92547 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
TOPBP1Q92547 TOMM22P1-201ENST00000418578 312 ntBASIC2.89□□□□□ -1.95
TOPBP1Q92547 AC009237.2-201ENST00000421358 284 ntBASIC2.89□□□□□ -1.95
TOPBP1Q92547 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.89□□□□□ -1.95
TOPBP1Q92547 AL645568.3-201ENST00000433683 316 ntBASIC2.89□□□□□ -1.95
TOPBP1Q92547 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.89□□□□□ -1.95
TOPBP1Q92547 XKRY2-201ENST00000442362 1093 ntBASIC2.89□□□□□ -1.95
TOPBP1Q92547 AC080013.2-201ENST00000460866 323 ntBASIC2.89□□□□□ -1.95
TOPBP1Q92547 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.89□□□□□ -1.95
TOPBP1Q92547 AC010265.1-201ENST00000513509 211 ntBASIC2.89□□□□□ -1.95
TOPBP1Q92547 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.89□□□□□ -1.95
TOPBP1Q92547 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.89□□□□□ -1.95
TOPBP1Q92547 AC002984.1-201ENST00000591692 448 ntBASIC2.89□□□□□ -1.95
TOPBP1Q92547 AC131902.3-201ENST00000611767 581 ntBASIC2.89□□□□□ -1.95
TOPBP1Q92547 AC092159.4-201ENST00000624944 550 ntBASIC2.89□□□□□ -1.95
TOPBP1Q92547 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.89□□□□□ -1.95
TOPBP1Q92547 MTND5P35-201ENST00000557537 1720 ntBASIC2.89□□□□□ -1.95
TOPBP1Q92547 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
TOPBP1Q92547 AC233981.2-201ENST00000611524 1614 ntBASIC2.89□□□□□ -1.95
TOPBP1Q92547 Y_RNA.327-201ENST00000365201 102 ntBASIC2.88□□□□□ -1.95
TOPBP1Q92547 AC240504.1-201ENST00000395709 845 ntBASIC2.88□□□□□ -1.95
TOPBP1Q92547 POLHP1-201ENST00000411806 470 ntBASIC2.88□□□□□ -1.95
TOPBP1Q92547 AC234782.4-201ENST00000417646 1048 ntBASIC2.88□□□□□ -1.95
TOPBP1Q92547 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.88□□□□□ -1.95
TOPBP1Q92547 FO393414.1-201ENST00000428697 1184 ntBASIC2.88□□□□□ -1.95
TOPBP1Q92547 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.88□□□□□ -1.95
TOPBP1Q92547 RPS7P2-201ENST00000435134 607 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms