Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.41□□□□□ -2.02
LINC01560Q8TB33 AL136370.1-201ENST00000608166 691 ntBASIC2.41□□□□□ -2.02
LINC01560Q8TB33 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
LINC01560Q8TB33 AC005332.6-201ENST00000613178 446 ntBASIC2.41□□□□□ -2.02
LINC01560Q8TB33 XIST_intron.1-201ENST00000619444 68 ntBASIC2.41□□□□□ -2.02
LINC01560Q8TB33 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.41□□□□□ -2.02
LINC01560Q8TB33 AL121895.2-201ENST00000619558 447 ntBASIC2.41□□□□□ -2.02
LINC01560Q8TB33 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LINC01560Q8TB33 SNORA50A-202ENST00000629536 136 ntBASIC2.41□□□□□ -2.02
LINC01560Q8TB33 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
LINC01560Q8TB33 U6.101-201ENST00000637707 76 ntBASIC2.41□□□□□ -2.02
LINC01560Q8TB33 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
LINC01560Q8TB33 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LINC01560Q8TB33 FAM35BP-202ENST00000497389 3337 ntBASIC2.41□□□□□ -2.02
LINC01560Q8TB33 AC109315.1-201ENST00000584143 1347 ntBASIC2.41□□□□□ -2.02
LINC01560Q8TB33 AC004925.1-201ENST00000624256 2706 ntBASIC2.4□□□□□ -2.02
LINC01560Q8TB33 AC092593.1-201ENST00000515413 1815 ntBASIC2.4□□□□□ -2.02
LINC01560Q8TB33 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
LINC01560Q8TB33 SNRPEP3-201ENST00000338402 276 ntBASIC2.4□□□□□ -2.03
LINC01560Q8TB33 SNORA46-201ENST00000384762 135 ntBASIC2.4□□□□□ -2.03
LINC01560Q8TB33 MIR512-1-201ENST00000384913 84 ntBASIC2.4□□□□□ -2.03
LINC01560Q8TB33 MIR506-201ENST00000384998 124 ntBASIC2.4□□□□□ -2.03
LINC01560Q8TB33 SNRPEP2-201ENST00000397592 279 ntBASIC2.4□□□□□ -2.03
LINC01560Q8TB33 RNU2-71P-201ENST00000411395 189 ntBASIC2.4□□□□□ -2.03
LINC01560Q8TB33 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.4□□□□□ -2.03
LINC01560Q8TB33 MYL8P-204ENST00000431574 518 ntBASIC2.4□□□□□ -2.03
LINC01560Q8TB33 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.4□□□□□ -2.03
LINC01560Q8TB33 RFC5P1-201ENST00000454419 874 ntBASIC2.4□□□□□ -2.03
LINC01560Q8TB33 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.4□□□□□ -2.03
LINC01560Q8TB33 TRBV12-1-201ENST00000479785 344 ntBASIC2.4□□□□□ -2.03
LINC01560Q8TB33 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.4□□□□□ -2.03
LINC01560Q8TB33 AC096751.1-202ENST00000502691 1067 ntBASIC2.4□□□□□ -2.03
LINC01560Q8TB33 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.4□□□□□ -2.03
LINC01560Q8TB33 AC004062.1-201ENST00000509926 645 ntBASIC2.4□□□□□ -2.03
LINC01560Q8TB33 TXNP6-201ENST00000510190 310 ntBASIC2.4□□□□□ -2.03
LINC01560Q8TB33 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.4□□□□□ -2.03
LINC01560Q8TB33 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.4□□□□□ -2.03
LINC01560Q8TB33 RNU6-1225P-201ENST00000516336 65 ntBASIC2.4□□□□□ -2.03
LINC01560Q8TB33 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.4□□□□□ -2.03
LINC01560Q8TB33 AC104986.1-201ENST00000517978 436 ntBASIC2.4□□□□□ -2.03
LINC01560Q8TB33 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.4□□□□□ -2.03
LINC01560Q8TB33 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.4□□□□□ -2.03
LINC01560Q8TB33 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
LINC01560Q8TB33 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.4□□□□□ -2.03
LINC01560Q8TB33 AL845331.3-202ENST00000562856 261 ntBASIC2.4□□□□□ -2.03
LINC01560Q8TB33 AC234778.2-201ENST00000566241 354 ntBASIC2.4□□□□□ -2.03
LINC01560Q8TB33 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.4□□□□□ -2.03
LINC01560Q8TB33 AC245036.5-201ENST00000596330 847 ntBASIC2.4□□□□□ -2.03
LINC01560Q8TB33 PART1_2.1-201ENST00000612397 250 ntBASIC2.4□□□□□ -2.03
LINC01560Q8TB33 AC024257.5-201ENST00000612739 531 ntBASIC2.4□□□□□ -2.03
LINC01560Q8TB33 AC092650.2-201ENST00000619984 902 ntBASIC2.4□□□□□ -2.03
LINC01560Q8TB33 AC120349.2-201ENST00000625002 298 ntBASIC2.4□□□□□ -2.03
LINC01560Q8TB33 AC243829.7-201ENST00000633081 225 ntBASIC2.4□□□□□ -2.03
LINC01560Q8TB33 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.4□□□□□ -2.03
LINC01560Q8TB33 AC107982.1-201ENST00000507171 1300 ntBASIC2.4□□□□□ -2.03
LINC01560Q8TB33 AC004972.1-201ENST00000623934 2209 ntBASIC2.4□□□□□ -2.03
LINC01560Q8TB33 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.39□□□□□ -2.03
LINC01560Q8TB33 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.39□□□□□ -2.03
LINC01560Q8TB33 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
LINC01560Q8TB33 RNU1-35P-201ENST00000362782 153 ntBASIC2.39□□□□□ -2.03
LINC01560Q8TB33 RNU6-216P-201ENST00000363282 104 ntBASIC2.39□□□□□ -2.03
LINC01560Q8TB33 RNA5SP68-201ENST00000363885 119 ntBASIC2.39□□□□□ -2.03
LINC01560Q8TB33 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LINC01560Q8TB33 MIR9-1-201ENST00000385198 89 ntBASIC2.39□□□□□ -2.03
LINC01560Q8TB33 MTCO3P12-201ENST00000416718 547 ntBASIC2.39□□□□□ -2.03
LINC01560Q8TB33 MRPL50P2-201ENST00000416821 482 ntBASIC2.39□□□□□ -2.03
LINC01560Q8TB33 Z75741.2-201ENST00000417272 1167 ntBASIC2.39□□□□□ -2.03
LINC01560Q8TB33 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.39□□□□□ -2.03
LINC01560Q8TB33 MRPS36P1-201ENST00000421291 307 ntBASIC2.39□□□□□ -2.03
LINC01560Q8TB33 AL354692.1-201ENST00000423044 315 ntBASIC2.39□□□□□ -2.03
LINC01560Q8TB33 GTF2IP23-201ENST00000423746 351 ntBASIC2.39□□□□□ -2.03
LINC01560Q8TB33 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.39□□□□□ -2.03
LINC01560Q8TB33 PSMA6P3-201ENST00000428242 164 ntBASIC2.39□□□□□ -2.03
LINC01560Q8TB33 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.39□□□□□ -2.03
LINC01560Q8TB33 NEK4P1-201ENST00000433383 879 ntBASIC2.39□□□□□ -2.03
LINC01560Q8TB33 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.39□□□□□ -2.03
LINC01560Q8TB33 HMGB1P12-201ENST00000438594 598 ntBASIC2.39□□□□□ -2.03
LINC01560Q8TB33 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.39□□□□□ -2.03
LINC01560Q8TB33 AL358794.1-201ENST00000445689 381 ntBASIC2.39□□□□□ -2.03
LINC01560Q8TB33 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.39□□□□□ -2.03
LINC01560Q8TB33 MTND2P19-201ENST00000449129 1012 ntBASIC2.39□□□□□ -2.03
LINC01560Q8TB33 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.39□□□□□ -2.03
LINC01560Q8TB33 USP9YP34-201ENST00000453983 808 ntBASIC2.39□□□□□ -2.03
LINC01560Q8TB33 RPL21P41-201ENST00000459863 264 ntBASIC2.39□□□□□ -2.03
LINC01560Q8TB33 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.39□□□□□ -2.03
LINC01560Q8TB33 MTCO3P35-201ENST00000485582 781 ntBASIC2.39□□□□□ -2.03
LINC01560Q8TB33 AC092185.1-201ENST00000491371 97 ntBASIC2.39□□□□□ -2.03
LINC01560Q8TB33 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.39□□□□□ -2.03
LINC01560Q8TB33 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.39□□□□□ -2.03
LINC01560Q8TB33 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.39□□□□□ -2.03
LINC01560Q8TB33 AC006445.2-201ENST00000510061 472 ntBASIC2.39□□□□□ -2.03
LINC01560Q8TB33 AC026412.2-201ENST00000512270 1075 ntBASIC2.39□□□□□ -2.03
LINC01560Q8TB33 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.39□□□□□ -2.03
LINC01560Q8TB33 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.39□□□□□ -2.03
LINC01560Q8TB33 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.39□□□□□ -2.03
LINC01560Q8TB33 TRAV37-201ENST00000553906 342 ntBASIC2.39□□□□□ -2.03
LINC01560Q8TB33 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.39□□□□□ -2.03
LINC01560Q8TB33 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.39□□□□□ -2.03
LINC01560Q8TB33 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.39□□□□□ -2.03
LINC01560Q8TB33 AC015688.2-201ENST00000584523 262 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms