Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 PROS2P-201ENST00000474651 1951 ntBASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 EXOC5P1-201ENST00000510543 1969 ntBASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 AC015799.1-201ENST00000622996 3122 ntBASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 Y_RNA.43-201ENST00000362670 111 ntBASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 RNU6-44P-201ENST00000384045 107 ntBASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 AL049745.1-201ENST00000433953 286 ntBASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 AC099670.2-201ENST00000435130 321 ntBASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 DAP3P1-201ENST00000441522 278 ntBASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 TPT1P12-201ENST00000448968 492 ntBASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 AC239809.1-201ENST00000450470 217 ntBASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 SNORD125-201ENST00000459538 96 ntBASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 ATP5LP5-201ENST00000483050 299 ntBASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 AL139099.1-201ENST00000497398 403 ntBASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 RNU6-919P-201ENST00000516731 104 ntBASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 AL133153.1-201ENST00000557756 303 ntBASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 AL078605.1-201ENST00000603529 500 ntBASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 AC023813.4-201ENST00000607580 580 ntBASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 AL136313.1-201ENST00000624804 202 ntBASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NKX2-3Q8TAU0 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 Y_RNA.16-201ENST00000362421 102 ntBASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 RN7SKP185-201ENST00000362813 326 ntBASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 Y_RNA.383-201ENST00000383855 97 ntBASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 Y_RNA.458-201ENST00000384240 102 ntBASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 AC010154.1-201ENST00000425857 269 ntBASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 AP000936.3-201ENST00000438127 255 ntBASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 SNORD121B-201ENST00000458838 81 ntBASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 AP000942.1-201ENST00000463969 747 ntBASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 AC083982.1-201ENST00000485679 344 ntBASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 RNU6-941P-201ENST00000516346 108 ntBASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 AC136777.2-201ENST00000522979 358 ntBASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 AC008962.1-201ENST00000605729 304 ntBASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 HSPE1P14-201ENST00000605812 302 ntBASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 MIR376A1-201ENST00000616574 68 ntBASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 AC073869.8-201ENST00000641806 335 ntBASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 LINC02555-201ENST00000563933 1951 ntBASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 AC100757.1-201ENST00000616872 1835 ntBASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NKX2-3Q8TAU0 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
NKX2-3Q8TAU0 AC009643.2-201ENST00000603543 1448 ntBASIC6.42□□□□□ -1.38
NKX2-3Q8TAU0 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NKX2-3Q8TAU0 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NKX2-3Q8TAU0 PANDAR-201ENST00000629595 1506 ntBASIC6.42□□□□□ -1.38
NKX2-3Q8TAU0 RNU6-715P-201ENST00000365204 103 ntBASIC6.42□□□□□ -1.38
NKX2-3Q8TAU0 RNU1-106P-201ENST00000384382 164 ntBASIC6.42□□□□□ -1.38
NKX2-3Q8TAU0 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
NKX2-3Q8TAU0 SNORA69.1-201ENST00000390904 137 ntBASIC6.42□□□□□ -1.38
NKX2-3Q8TAU0 RPL11P3-201ENST00000395256 523 ntBASIC6.42□□□□□ -1.38
NKX2-3Q8TAU0 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.42□□□□□ -1.38
NKX2-3Q8TAU0 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.42□□□□□ -1.38
NKX2-3Q8TAU0 AC093162.1-201ENST00000419682 124 ntBASIC6.42□□□□□ -1.38
NKX2-3Q8TAU0 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.42□□□□□ -1.38
NKX2-3Q8TAU0 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.42□□□□□ -1.38
NKX2-3Q8TAU0 LINC02210-201ENST00000444561 288 ntBASIC6.42□□□□□ -1.38
NKX2-3Q8TAU0 AL389915.2-201ENST00000454576 441 ntBASIC6.42□□□□□ -1.38
NKX2-3Q8TAU0 BX284632.1-201ENST00000478218 541 ntBASIC6.42□□□□□ -1.38
NKX2-3Q8TAU0 AC087190.1-201ENST00000484462 480 ntBASIC6.42□□□□□ -1.38
NKX2-3Q8TAU0 AC107032.1-201ENST00000485945 480 ntBASIC6.42□□□□□ -1.38
NKX2-3Q8TAU0 SCARNA20.4-201ENST00000516969 131 ntBASIC6.42□□□□□ -1.38
NKX2-3Q8TAU0 MIR4300-201ENST00000581016 96 ntBASIC6.42□□□□□ -1.38
NKX2-3Q8TAU0 FAM25E-202ENST00000608562 189 ntBASIC6.42□□□□□ -1.38
NKX2-3Q8TAU0 AL591516.1-201ENST00000611326 274 ntBASIC6.42□□□□□ -1.38
NKX2-3Q8TAU0 MIR378J-201ENST00000611988 109 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms