Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 AC067945.1-201ENST00000342609 618 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 SNORA7.2-201ENST00000364446 145 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 RNU1-64P-201ENST00000365443 163 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 RPS26P8-201ENST00000393490 348 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 RNU6-1068P-201ENST00000410958 103 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 AC011933.1-201ENST00000413334 321 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 RPL7AP25-201ENST00000423357 805 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 DUTP6-201ENST00000425573 462 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 RPL23AP43-201ENST00000446445 471 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 GAPDHP27-201ENST00000447427 1020 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 RPS24P6-201ENST00000452670 400 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 CACYBPP2-201ENST00000453625 678 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 AC116533.1-201ENST00000459748 321 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 AP000942.1-201ENST00000463969 747 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 AC091153.1-201ENST00000466297 402 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 AC108078.2-201ENST00000510750 236 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 AC074344.1-201ENST00000512823 224 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 MTCO1P35-201ENST00000515270 228 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 SNORD27.1-201ENST00000516319 72 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 RNA5SP503-201ENST00000517047 117 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 CYCSP40-201ENST00000575927 294 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 AC006116.10-201ENST00000591836 581 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 VN1R85P-201ENST00000601587 426 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 AL158032.1-201ENST00000605401 106 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 AC008945.2-201ENST00000606056 604 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 MIR8069-1-201ENST00000616627 86 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 MIR8069-2-201ENST00000621412 86 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 AL008636.1-201ENST00000625038 1018 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 AC009643.2-201ENST00000603543 1448 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 AC087190.4-201ENST00000574616 8334 ntBASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
SYNPOQ8N3V7 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 BDP1P-201ENST00000582658 1990 ntBASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 AC021146.4-201ENST00000309229 279 ntBASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 Y_RNA.88-201ENST00000363029 99 ntBASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 SNORA24.1-201ENST00000384401 135 ntBASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 RNU6-908P-201ENST00000410160 94 ntBASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 AC068533.1-201ENST00000418542 415 ntBASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 RPS12P10-201ENST00000427031 377 ntBASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 NUTF2P3-201ENST00000448540 384 ntBASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 AL356010.1-201ENST00000456364 102 ntBASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 AL163973.1-201ENST00000484753 577 ntBASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 AC020890.1-201ENST00000491837 504 ntBASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 AC078817.1-201ENST00000492623 435 ntBASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 AC106872.2-201ENST00000494303 480 ntBASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 AL121579.1-201ENST00000555129 305 ntBASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 AL355836.1-201ENST00000555951 870 ntBASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 IPO5P1-202ENST00000600039 287 ntBASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 AL445567.2-201ENST00000618935 498 ntBASIC4.69□□□□□ -1.66
SYNPOQ8N3V7 DHX9P1-201ENST00000436565 3076 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms