Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 MTCYBP34-201ENST00000439552 670 ntBASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 AC011825.1-201ENST00000484967 388 ntBASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 GMPSP1-201ENST00000514075 579 ntBASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 RNU6-27P-201ENST00000516146 107 ntBASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 RNU1-143P-201ENST00000516296 146 ntBASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 DEFB131D-201ENST00000526803 184 ntBASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 AP003461.1-201ENST00000528866 78 ntBASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 AC009094.1-201ENST00000564443 426 ntBASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 VN1R92P-201ENST00000598511 928 ntBASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 AC004987.4-201ENST00000603383 338 ntBASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 RPL23AP92-201ENST00000603609 255 ntBASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 U1.23-201ENST00000610293 146 ntBASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 RNU1-68P-201ENST00000615382 146 ntBASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 AC025588.4-201ENST00000615802 908 ntBASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 U1.39-201ENST00000621562 146 ntBASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 AC017037.3-201ENST00000625016 472 ntBASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 AC103706.2-201ENST00000638080 240 ntBASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 MIR622-201ENST00000638396 96 ntBASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 AP001350.1-201ENST00000601906 1524 ntBASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.47□□□□□ -1.85
CCDC60Q8IWA6 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.46□□□□□ -1.85
CCDC60Q8IWA6 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
CCDC60Q8IWA6 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 SNORD15B-201ENST00000384714 146 ntBASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 RNU6-837P-201ENST00000391056 108 ntBASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 UBA52P6-201ENST00000399822 382 ntBASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 RSL24D1P4-201ENST00000400938 484 ntBASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 AP000567.1-201ENST00000406413 156 ntBASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 RNU2-71P-201ENST00000411395 189 ntBASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 NEK4P1-201ENST00000433383 879 ntBASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 AL590103.1-201ENST00000434488 307 ntBASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 AL354941.1-201ENST00000438600 464 ntBASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 AL008629.1-201ENST00000438615 184 ntBASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 ISCA1P2-201ENST00000438679 421 ntBASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 MTND2P19-201ENST00000449129 1012 ntBASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 snoU13.3-201ENST00000459441 104 ntBASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 AC090453.1-201ENST00000495560 436 ntBASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 AC080014.1-201ENST00000496877 1201 ntBASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 AC006499.2-201ENST00000513470 337 ntBASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 MTND3P12-201ENST00000559068 328 ntBASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 AL353778.1-201ENST00000603149 408 ntBASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 AC112220.3-201ENST00000605502 502 ntBASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 AL136981.2-201ENST00000617319 734 ntBASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 AC018755.4-201ENST00000619715 454 ntBASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 AC018816.2-201ENST00000621460 353 ntBASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 AC073476.4-201ENST00000628409 72 ntBASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC60Q8IWA6 ZNF542P-204ENST00000482727 1305 ntBASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 ZNF807-201ENST00000328088 1707 ntBASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms