Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 AC011825.1-201ENST00000484967 388 ntBASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 AC118282.2-201ENST00000508739 374 ntBASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 AC109471.1-201ENST00000511631 612 ntBASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 AC119751.5-201ENST00000514077 770 ntBASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 MTCO3P27-201ENST00000514397 196 ntBASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 RNU1-103P-201ENST00000516502 125 ntBASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 RPPH1-2P-201ENST00000516688 293 ntBASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 SNORA31.21-201ENST00000517180 77 ntBASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 AP003355.1-201ENST00000518956 587 ntBASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 AC092451.2-201ENST00000538746 658 ntBASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 AP001330.4-201ENST00000604350 154 ntBASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 AC002487.1-201ENST00000604565 994 ntBASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 AL049780.3-201ENST00000624612 1583 ntBASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 AC111188.2-201ENST00000529697 1387 ntBASIC2.73□□□□□ -1.97
CDKL3Q8IVW4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 RNU5B-1-201ENST00000363286 116 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 RNU1-100P-201ENST00000365255 165 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 RNU6-549P-201ENST00000384433 107 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 MTND4P13-201ENST00000402078 1023 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 TMSB4XP8-201ENST00000402089 135 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 AL355615.1-201ENST00000406187 641 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 SNORA11.2-201ENST00000408318 127 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 AC092638.1-201ENST00000411966 1275 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 TMSB4XP6-201ENST00000415187 135 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 SFR1P2-201ENST00000421841 730 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 TMSB4XP1-201ENST00000424567 135 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 AL645638.1-201ENST00000440519 361 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 SETP11-201ENST00000473027 690 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 AL049873.1-201ENST00000480540 376 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 AC092902.1-201ENST00000486999 259 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 AC080014.1-201ENST00000496877 1201 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 NAMPTP2-201ENST00000505629 1115 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 AC091860.1-201ENST00000505723 432 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 ZNF705CP-201ENST00000530515 889 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 SNRPGP16-201ENST00000533275 226 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 AC018630.1-201ENST00000541376 925 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 AL161734.1-201ENST00000609720 557 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 VN1R74P-201ENST00000613259 503 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 AC140725.3-201ENST00000616193 880 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 AC009318.4-201ENST00000620496 486 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 AC103798.2-201ENST00000624292 632 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 SCARNA15.3-201ENST00000626315 122 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 SCARNA4.1-201ENST00000628597 123 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 ZNF663P-202ENST00000641770 1131 ntBASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CDKL3Q8IVW4 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 MIR9-1-201ENST00000385198 89 ntBASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 RNA5SP210-201ENST00000391034 120 ntBASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 RPL23AP16-201ENST00000441715 421 ntBASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 RPS20P24-201ENST00000457473 361 ntBASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 AP001486.1-201ENST00000463339 476 ntBASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 AC048346.1-201ENST00000510247 144 ntBASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 RNA5SP367-201ENST00000516557 118 ntBASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 ARL2BPP5-201ENST00000523141 481 ntBASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 OR7K1P-201ENST00000546439 926 ntBASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 CYB5AP5-201ENST00000549779 389 ntBASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 AC079600.2-201ENST00000550076 130 ntBASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 AC126177.3-201ENST00000551839 688 ntBASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 AC090666.1-201ENST00000578241 445 ntBASIC2.71□□□□□ -1.98
CDKL3Q8IVW4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms