Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.07□□□□□ -1.76
HERC6Q8IVU3 LARP1BP3-201ENST00000437229 869 ntBASIC4.07□□□□□ -1.76
HERC6Q8IVU3 AC091862.1-201ENST00000438016 1100 ntBASIC4.07□□□□□ -1.76
HERC6Q8IVU3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.07□□□□□ -1.76
HERC6Q8IVU3 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.07□□□□□ -1.76
HERC6Q8IVU3 AC118469.1-201ENST00000442943 488 ntBASIC4.07□□□□□ -1.76
HERC6Q8IVU3 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.07□□□□□ -1.76
HERC6Q8IVU3 COX6CP12-201ENST00000446748 202 ntBASIC4.07□□□□□ -1.76
HERC6Q8IVU3 AC104308.1-201ENST00000454621 333 ntBASIC4.07□□□□□ -1.76
HERC6Q8IVU3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.07□□□□□ -1.76
HERC6Q8IVU3 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.07□□□□□ -1.76
HERC6Q8IVU3 FTH1P9-201ENST00000513251 355 ntBASIC4.07□□□□□ -1.76
HERC6Q8IVU3 RNU1-103P-201ENST00000516502 125 ntBASIC4.07□□□□□ -1.76
HERC6Q8IVU3 MIR2114-201ENST00000516645 80 ntBASIC4.07□□□□□ -1.76
HERC6Q8IVU3 HIGD1AP10-201ENST00000527837 282 ntBASIC4.07□□□□□ -1.76
HERC6Q8IVU3 OR5D17P-201ENST00000531492 978 ntBASIC4.07□□□□□ -1.76
HERC6Q8IVU3 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.07□□□□□ -1.76
HERC6Q8IVU3 GNRHR2P1-201ENST00000555315 631 ntBASIC4.07□□□□□ -1.76
HERC6Q8IVU3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.07□□□□□ -1.76
HERC6Q8IVU3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.07□□□□□ -1.76
HERC6Q8IVU3 AC110760.3-201ENST00000598794 467 ntBASIC4.07□□□□□ -1.76
HERC6Q8IVU3 BCRP9-201ENST00000605312 388 ntBASIC4.07□□□□□ -1.76
HERC6Q8IVU3 MIR8058-201ENST00000615737 89 ntBASIC4.07□□□□□ -1.76
HERC6Q8IVU3 AL591424.2-201ENST00000617023 128 ntBASIC4.07□□□□□ -1.76
HERC6Q8IVU3 SCARNA15.3-201ENST00000626315 122 ntBASIC4.07□□□□□ -1.76
HERC6Q8IVU3 SCARNA4.1-201ENST00000628597 123 ntBASIC4.07□□□□□ -1.76
HERC6Q8IVU3 AL773545.4-201ENST00000637262 310 ntBASIC4.07□□□□□ -1.76
HERC6Q8IVU3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.07□□□□□ -1.76
HERC6Q8IVU3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
HERC6Q8IVU3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.07□□□□□ -1.76
HERC6Q8IVU3 AL513478.4-201ENST00000641636 310 ntBASIC4.07□□□□□ -1.76
HERC6Q8IVU3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.07□□□□□ -1.76
HERC6Q8IVU3 AC009902.3-201ENST00000606235 2172 ntBASIC4.07□□□□□ -1.76
HERC6Q8IVU3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
HERC6Q8IVU3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HERC6Q8IVU3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HERC6Q8IVU3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HERC6Q8IVU3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
HERC6Q8IVU3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HERC6Q8IVU3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.06□□□□□ -1.76
HERC6Q8IVU3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
HERC6Q8IVU3 MTND4P4-201ENST00000439033 1366 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 AC092125.1-201ENST00000562568 1995 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 RNU6-600P-201ENST00000362524 99 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 RNU5F-6P-201ENST00000362979 116 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.06□□□□□ -1.76
HERC6Q8IVU3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 RNU2-71P-201ENST00000411395 189 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 HMGN1P24-201ENST00000412282 298 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 NPM1P11-201ENST00000417106 855 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.06□□□□□ -1.76
HERC6Q8IVU3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.06□□□□□ -1.76
HERC6Q8IVU3 BX119904.4-201ENST00000424402 301 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 AL445669.1-201ENST00000426743 755 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.06□□□□□ -1.76
HERC6Q8IVU3 AC096638.2-201ENST00000434965 711 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 RPL22P17-201ENST00000438729 315 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.06□□□□□ -1.76
HERC6Q8IVU3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HERC6Q8IVU3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.06□□□□□ -1.76
HERC6Q8IVU3 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.06□□□□□ -1.76
HERC6Q8IVU3 AP000797.1-201ENST00000478870 387 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 RPL23AP41-201ENST00000484754 458 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 AC112204.1-201ENST00000502591 103 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 HMGB1P22-201ENST00000505315 124 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 AC026784.1-201ENST00000507986 352 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 AC021146.1-201ENST00000511202 716 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.06□□□□□ -1.76
HERC6Q8IVU3 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.06□□□□□ -1.76
HERC6Q8IVU3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.06□□□□□ -1.76
HERC6Q8IVU3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.06□□□□□ -1.76
HERC6Q8IVU3 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.06□□□□□ -1.76
HERC6Q8IVU3 NBR2-204ENST00000587322 63 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 AC040904.1-201ENST00000590850 223 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.06□□□□□ -1.76
HERC6Q8IVU3 AC080013.6-201ENST00000606185 215 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 AL158211.4-201ENST00000606988 584 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 Z69908.1-201ENST00000622603 247 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.06□□□□□ -1.76
HERC6Q8IVU3 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.06□□□□□ -1.76
HERC6Q8IVU3 AC025048.6-202ENST00000627667 438 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.06□□□□□ -1.76
HERC6Q8IVU3 AP003399.1-201ENST00000637534 361 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 USP8P1-201ENST00000494673 3183 ntBASIC4.06□□□□□ -1.76
HERC6Q8IVU3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
HERC6Q8IVU3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HERC6Q8IVU3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HERC6Q8IVU3 CCT4P2-201ENST00000233836 1548 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HERC6Q8IVU3 LINC02471-203ENST00000641941 4752 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.05□□□□□ -1.76
HERC6Q8IVU3 Y_RNA.97-201ENST00000363094 102 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.05□□□□□ -1.76
HERC6Q8IVU3 SNORD116-1-201ENST00000384335 95 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 MIR128-1-201ENST00000384921 82 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 MTCYBP36-201ENST00000404146 440 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 RNU2-43P-201ENST00000410306 190 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 RNA5SP120-201ENST00000410900 112 ntBASIC4.05□□□□□ -1.76
HERC6Q8IVU3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.05□□□□□ -1.76
HERC6Q8IVU3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms