Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 RPL23P2-201ENST00000320371 421 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 RNA5SP90-201ENST00000364801 99 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 SNORA23-201ENST00000365128 182 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 RNU5E-6P-201ENST00000365574 115 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 SNORA67-201ENST00000384423 137 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 Y_RNA.506-201ENST00000384494 102 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 Y_RNA.518-201ENST00000384552 113 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 MIR105-2-201ENST00000385083 81 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 SNORD70.1-201ENST00000391007 85 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 AP000580.1-201ENST00000404439 358 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 DNAJC19P7-201ENST00000428811 344 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 CEACAMP9-201ENST00000442990 513 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 AC087879.1-201ENST00000474343 374 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 RPS4XP20-201ENST00000505751 772 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 AC108078.2-201ENST00000510750 236 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 SNORA40.14-201ENST00000516543 86 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 FTH1P11-201ENST00000517577 551 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 AL049779.2-201ENST00000553847 315 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 AC127381.1-201ENST00000555979 939 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 SUB1P3-201ENST00000564581 315 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 MIR3691-201ENST00000578066 90 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 AC010620.2-201ENST00000600135 313 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 AC006557.5-201ENST00000603126 811 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 AC006363.1-201ENST00000603806 463 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 ADAM5-202ENST00000399789 1942 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 ZNF33CP-201ENST00000432492 2030 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 AC027287.1-201ENST00000553115 1453 ntBASIC4.73□□□□□ -1.65
ATG4DQ86TL0 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
ATG4DQ86TL0 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ATG4DQ86TL0 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ATG4DQ86TL0 MAPK10-328ENST00000641553 4009 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.72□□□□□ -1.65
ATG4DQ86TL0 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ATG4DQ86TL0 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.72□□□□□ -1.65
ATG4DQ86TL0 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.72□□□□□ -1.65
ATG4DQ86TL0 RNU6-545P-201ENST00000362681 104 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.72□□□□□ -1.65
ATG4DQ86TL0 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATG4DQ86TL0 SNORA70-201ENST00000384436 135 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 Y_RNA.551-201ENST00000384661 102 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 MIR223-201ENST00000385204 110 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
ATG4DQ86TL0 SNORA16.2-201ENST00000390991 127 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 AC097374.1-203ENST00000400783 485 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 HMGN1P24-201ENST00000412282 298 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 RPLP0P7-201ENST00000416050 667 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4DQ86TL0 EI24P4-201ENST00000423683 1078 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 RPL12P34-201ENST00000424532 479 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.72□□□□□ -1.65
ATG4DQ86TL0 AC097713.2-201ENST00000430199 356 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 AC009238.2-201ENST00000431026 355 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4DQ86TL0 AC092162.1-201ENST00000432828 434 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 AL353597.2-202ENST00000434901 373 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 RPS29P10-201ENST00000439197 166 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 NOTCH2P1-201ENST00000443481 624 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 Z92846.1-201ENST00000456203 268 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 RPS18P6-201ENST00000476880 458 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 RPS21P4-201ENST00000487122 248 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 DEFB109F-201ENST00000491870 277 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4DQ86TL0 RNU6-897P-201ENST00000517135 105 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.72□□□□□ -1.65
ATG4DQ86TL0 OR10G5P-201ENST00000532733 358 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4DQ86TL0 AC026371.1-201ENST00000551867 419 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.72□□□□□ -1.65
ATG4DQ86TL0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms