Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
USP43Q70EL4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
USP43Q70EL4 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.63□□□□□ -1.83
USP43Q70EL4 USP8P1-201ENST00000494673 3183 ntBASIC3.63□□□□□ -1.83
USP43Q70EL4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
USP43Q70EL4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
USP43Q70EL4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.62□□□□□ -1.83
USP43Q70EL4 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
USP43Q70EL4 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
USP43Q70EL4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.62□□□□□ -1.83
USP43Q70EL4 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
USP43Q70EL4 Y_RNA.160-201ENST00000363677 92 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 RNU6-1090P-201ENST00000364065 94 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
USP43Q70EL4 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.62□□□□□ -1.83
USP43Q70EL4 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
USP43Q70EL4 RNU6-317P-201ENST00000384031 107 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 CALM2P3-201ENST00000400429 449 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 PPIAP31-201ENST00000405422 495 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 FCF1P10-201ENST00000407590 479 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 MIR1251-201ENST00000408552 70 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.62□□□□□ -1.83
USP43Q70EL4 AC007390.1-201ENST00000415722 356 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 RPL36AP36-201ENST00000418616 301 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 AL139095.3-201ENST00000419672 1203 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.62□□□□□ -1.83
USP43Q70EL4 AC233728.2-201ENST00000425348 757 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.62□□□□□ -1.83
USP43Q70EL4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.62□□□□□ -1.83
USP43Q70EL4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.62□□□□□ -1.83
USP43Q70EL4 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.62□□□□□ -1.83
USP43Q70EL4 CBX1P4-201ENST00000439415 457 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 AL022238.1-201ENST00000442557 355 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.62□□□□□ -1.83
USP43Q70EL4 DHFRP3-201ENST00000455595 559 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 RPL23AP62-201ENST00000463396 453 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 AP000797.1-201ENST00000478870 387 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 RPS27P23-201ENST00000487608 251 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 HMGN1P13-201ENST00000505795 138 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 AC114786.4-201ENST00000508771 728 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.62□□□□□ -1.83
USP43Q70EL4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.62□□□□□ -1.83
USP43Q70EL4 RNU6-327P-201ENST00000516270 127 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 RNU6-885P-201ENST00000516607 104 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 RNU7-143P-201ENST00000516781 65 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
USP43Q70EL4 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.62□□□□□ -1.83
USP43Q70EL4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.62□□□□□ -1.83
USP43Q70EL4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.62□□□□□ -1.83
USP43Q70EL4 AC125611.2-201ENST00000551907 647 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 TRAV15-201ENST00000556680 249 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.62□□□□□ -1.83
USP43Q70EL4 AL845331.3-202ENST00000562856 261 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.62□□□□□ -1.83
USP43Q70EL4 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.62□□□□□ -1.83
USP43Q70EL4 AC022968.1-201ENST00000567372 442 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 AC138915.2-201ENST00000569776 97 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 RPL23AP87-202ENST00000573039 466 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.62□□□□□ -1.83
USP43Q70EL4 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.62□□□□□ -1.83
USP43Q70EL4 AL596327.1-201ENST00000603629 213 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 AC113403.1-201ENST00000604910 193 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 RMST_8.1-201ENST00000610287 165 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
USP43Q70EL4 AC243654.2-201ENST00000612843 443 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 AC092650.2-201ENST00000619984 902 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 AC079684.1-201ENST00000621405 437 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 AC138649.3-201ENST00000622154 254 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 RNA5SP196-201ENST00000625967 102 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.62□□□□□ -1.83
USP43Q70EL4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
USP43Q70EL4 AC107982.1-201ENST00000507171 1300 ntBASIC3.62□□□□□ -1.83
USP43Q70EL4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
USP43Q70EL4 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
USP43Q70EL4 CDR1-202ENST00000625883 1485 ntBASIC3.61□□□□□ -1.83
USP43Q70EL4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.61□□□□□ -1.83
USP43Q70EL4 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
USP43Q70EL4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
USP43Q70EL4 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
USP43Q70EL4 RNU4-79P-201ENST00000362764 141 ntBASIC3.61□□□□□ -1.83
USP43Q70EL4 RNU5F-6P-201ENST00000362979 116 ntBASIC3.61□□□□□ -1.83
USP43Q70EL4 RNU6-582P-201ENST00000362989 107 ntBASIC3.61□□□□□ -1.83
USP43Q70EL4 Y_RNA.356-201ENST00000365475 113 ntBASIC3.61□□□□□ -1.83
USP43Q70EL4 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
USP43Q70EL4 RNU1-13P-201ENST00000384499 162 ntBASIC3.61□□□□□ -1.83
USP43Q70EL4 SNORD116-23-201ENST00000384645 92 ntBASIC3.61□□□□□ -1.83
USP43Q70EL4 MIR184-201ENST00000384962 84 ntBASIC3.61□□□□□ -1.83
USP43Q70EL4 HSPE1P8-201ENST00000406997 288 ntBASIC3.61□□□□□ -1.83
USP43Q70EL4 SNORA11F-201ENST00000408237 128 ntBASIC3.61□□□□□ -1.83
USP43Q70EL4 RNA5SP317-201ENST00000410176 116 ntBASIC3.61□□□□□ -1.83
USP43Q70EL4 RNU6-628P-201ENST00000410675 107 ntBASIC3.61□□□□□ -1.83
USP43Q70EL4 RNA5SP311-201ENST00000411290 116 ntBASIC3.61□□□□□ -1.83
USP43Q70EL4 AC004987.3-201ENST00000413879 771 ntBASIC3.61□□□□□ -1.83
USP43Q70EL4 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.61□□□□□ -1.83
USP43Q70EL4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.61□□□□□ -1.83
USP43Q70EL4 AL389915.1-201ENST00000422463 466 ntBASIC3.61□□□□□ -1.83
USP43Q70EL4 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 154.1 ms