Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 AC087045.1-201ENST00000605856 382 ntBASIC3.72□□□□□ -1.81
COLCA1Q6ZS62 RNA5SP108-201ENST00000605921 117 ntBASIC3.72□□□□□ -1.81
COLCA1Q6ZS62 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.72□□□□□ -1.81
COLCA1Q6ZS62 AC010133.1-201ENST00000615809 842 ntBASIC3.72□□□□□ -1.81
COLCA1Q6ZS62 AC006504.8-201ENST00000621046 635 ntBASIC3.72□□□□□ -1.81
COLCA1Q6ZS62 YWHAEP7-203ENST00000622054 312 ntBASIC3.72□□□□□ -1.81
COLCA1Q6ZS62 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
COLCA1Q6ZS62 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
COLCA1Q6ZS62 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COLCA1Q6ZS62 AC097714.1-201ENST00000511272 1647 ntBASIC3.72□□□□□ -1.81
COLCA1Q6ZS62 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COLCA1Q6ZS62 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.72□□□□□ -1.81
COLCA1Q6ZS62 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
COLCA1Q6ZS62 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
COLCA1Q6ZS62 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.71□□□□□ -1.81
COLCA1Q6ZS62 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
COLCA1Q6ZS62 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AL161781.1-201ENST00000354277 403 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 RNU6-28P-201ENST00000362378 107 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 Y_RNA.86-201ENST00000363020 111 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 RNA5SP447-201ENST00000363749 119 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 Y_RNA.234-201ENST00000364409 97 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 RNU6-356P-201ENST00000384140 107 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 Y_RNA.481-201ENST00000384373 102 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 RNU6-1158P-201ENST00000391167 107 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 RNU2-8P-201ENST00000410727 190 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 RPS23P10-201ENST00000416185 486 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AL807761.1-201ENST00000417622 171 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AL136380.1-201ENST00000447970 162 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 RPL23AP24-201ENST00000458203 385 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AP001992.1-205ENST00000462248 379 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 RPL23AP62-201ENST00000463396 453 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 RN7SL481P-201ENST00000477764 299 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 RN7SL691P-201ENST00000494487 301 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AC108145.1-201ENST00000503770 153 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AC093767.1-201ENST00000504523 156 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AC110792.2-201ENST00000510278 224 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AC093853.1-201ENST00000515689 483 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AC090572.1-201ENST00000519251 160 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AP003072.2-201ENST00000527756 676 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 OR8L1P-201ENST00000534005 955 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 TRAV8-5-201ENST00000537369 341 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AP001429.1-201ENST00000602568 530 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AC008745.1-201ENST00000604064 271 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AL356218.2-201ENST00000605264 187 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 BNIP3P10-201ENST00000605360 577 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 MIR6864-201ENST00000617935 70 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AC006065.5-201ENST00000623427 349 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AC009161.2-201ENST00000624626 138 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 MIR7641-1-201ENST00000627518 61 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AC008013.2-202ENST00000637965 364 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 AC006026.1-201ENST00000444025 1803 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 ELL2P4-201ENST00000446870 1376 ntBASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.71□□□□□ -1.82
COLCA1Q6ZS62 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
COLCA1Q6ZS62 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms