Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 RNU6-1040P-201ENST00000383974 107 ntBASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 U3.36-201ENST00000408418 213 ntBASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 MIR548F4-201ENST00000408515 105 ntBASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 AC009302.1-201ENST00000417147 390 ntBASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 MCFD2P1-201ENST00000417812 300 ntBASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 EIF4HP2-201ENST00000424380 563 ntBASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 RPL35AP22-201ENST00000436855 335 ntBASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 RPS15AP27-201ENST00000449183 343 ntBASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 RPS17P2-201ENST00000461663 408 ntBASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 AC005532.2-201ENST00000467154 373 ntBASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 RPL23AP55-201ENST00000498163 452 ntBASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 AC008526.1-201ENST00000509149 338 ntBASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 AC021146.3-201ENST00000511911 260 ntBASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 AC073539.2-201ENST00000597113 165 ntBASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 ATP1B3P1-201ENST00000605365 821 ntBASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 AC007485.1-201ENST00000616755 206 ntBASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 AC005086.4-201ENST00000623065 213 ntBASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 AC022418.1-201ENST00000624118 445 ntBASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 AL596275.2-204ENST00000641628 552 ntBASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 AL596275.2-206ENST00000641957 626 ntBASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 DHX9P1-201ENST00000436565 3076 ntBASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF111Q6ZNA4 GABPAP-201ENST00000419271 1356 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 KPNA2P1-201ENST00000458289 1591 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 RN7SKP104-201ENST00000362605 328 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 RN7SKP113-201ENST00000363891 295 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 Y_RNA.193-201ENST00000363979 102 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 SNORD51-201ENST00000384320 80 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 RNU6-1127P-201ENST00000384580 107 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 ENSAP1-201ENST00000392855 326 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 MIR450B-201ENST00000401182 78 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 MRPL42P3-201ENST00000401492 326 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 AL139095.3-201ENST00000419672 1203 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 NUP35P1-201ENST00000422734 947 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 PDSS1P1-201ENST00000422953 1114 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 COX6CP13-201ENST00000428703 226 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 AL162388.1-201ENST00000450912 352 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 AC091180.1-201ENST00000462104 372 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 AP000942.1-201ENST00000463969 747 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 AC017037.1-201ENST00000508460 471 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 AC005798.1-201ENST00000513715 387 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 RN7SKP260-201ENST00000516907 149 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 IGKV2D-36-201ENST00000518643 226 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 RANP3-201ENST00000530970 276 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 GSTP1P1-201ENST00000548078 319 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 AC106782.4-201ENST00000568264 210 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 AC010653.1-201ENST00000571108 881 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 RN7SL176P-201ENST00000580352 264 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 RN7SL52P-201ENST00000584271 284 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 OR7E18P-201ENST00000592589 702 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 AL138726.1-201ENST00000614873 333 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 AC007792.1-201ENST00000623023 402 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 AP001784.1-201ENST00000624107 428 ntBASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
RNF111Q6ZNA4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms