Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
RNF43Q68DV7 MTND1P19-201ENST00000511780 315 ntBASIC5.29□□□□□ -1.56
RNF43Q68DV7 Y_RNA.708-201ENST00000516950 96 ntBASIC5.29□□□□□ -1.56
RNF43Q68DV7 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.29□□□□□ -1.56
RNF43Q68DV7 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.29□□□□□ -1.56
RNF43Q68DV7 OR4P1P-201ENST00000530808 1136 ntBASIC5.29□□□□□ -1.56
RNF43Q68DV7 AL137161.1-201ENST00000532231 390 ntBASIC5.29□□□□□ -1.56
RNF43Q68DV7 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF43Q68DV7 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF43Q68DV7 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RNF43Q68DV7 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RNF43Q68DV7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF43Q68DV7 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF43Q68DV7 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
RNF43Q68DV7 AC011477.5-201ENST00000586571 259 ntBASIC5.29□□□□□ -1.56
RNF43Q68DV7 AC125232.2-201ENST00000592457 143 ntBASIC5.29□□□□□ -1.56
RNF43Q68DV7 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.29□□□□□ -1.56
RNF43Q68DV7 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.29□□□□□ -1.56
RNF43Q68DV7 AC087385.3-201ENST00000620477 187 ntBASIC5.29□□□□□ -1.56
RNF43Q68DV7 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.29□□□□□ -1.56
RNF43Q68DV7 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF43Q68DV7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RNF43Q68DV7 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF43Q68DV7 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RNF43Q68DV7 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RNF43Q68DV7 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RNF43Q68DV7 AL450345.1-202ENST00000605741 3881 ntBASIC5.29□□□□□ -1.56
RNF43Q68DV7 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF43Q68DV7 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.29□□□□□ -1.56
RNF43Q68DV7 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.29□□□□□ -1.56
RNF43Q68DV7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
RNF43Q68DV7 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF43Q68DV7 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RNF43Q68DV7 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF43Q68DV7 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.28□□□□□ -1.56
RNF43Q68DV7 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
RNF43Q68DV7 AC015813.6-201ENST00000624409 5808 ntBASIC5.28□□□□□ -1.56
RNF43Q68DV7 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF43Q68DV7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RNF43Q68DV7 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.28□□□□□ -1.56
RNF43Q68DV7 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF43Q68DV7 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF43Q68DV7 Y_RNA.152-201ENST00000363578 100 ntBASIC5.28□□□□□ -1.56
RNF43Q68DV7 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF43Q68DV7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF43Q68DV7 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNF43Q68DV7 RNU6-398P-201ENST00000384143 109 ntBASIC5.28□□□□□ -1.56
RNF43Q68DV7 Y_RNA.461-201ENST00000384263 103 ntBASIC5.28□□□□□ -1.56
RNF43Q68DV7 RNU6-713P-201ENST00000384761 107 ntBASIC5.28□□□□□ -1.56
RNF43Q68DV7 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.28□□□□□ -1.56
RNF43Q68DV7 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.28□□□□□ -1.56
RNF43Q68DV7 AC139712.2-201ENST00000424302 339 ntBASIC5.28□□□□□ -1.56
RNF43Q68DV7 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.28□□□□□ -1.56
RNF43Q68DV7 AC009238.2-201ENST00000431026 355 ntBASIC5.28□□□□□ -1.56
RNF43Q68DV7 YWHAZP8-201ENST00000436935 731 ntBASIC5.28□□□□□ -1.56
RNF43Q68DV7 AC092013.1-201ENST00000438795 332 ntBASIC5.28□□□□□ -1.56
RNF43Q68DV7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.28□□□□□ -1.56
RNF43Q68DV7 RN7SL189P-201ENST00000468631 289 ntBASIC5.28□□□□□ -1.56
RNF43Q68DV7 AP000893.1-201ENST00000474462 794 ntBASIC5.28□□□□□ -1.56
RNF43Q68DV7 RPL7AP10-201ENST00000481016 791 ntBASIC5.28□□□□□ -1.56
RNF43Q68DV7 AC020893.1-201ENST00000502452 580 ntBASIC5.28□□□□□ -1.56
RNF43Q68DV7 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.28□□□□□ -1.56
RNF43Q68DV7 RNU6-120P-201ENST00000516077 103 ntBASIC5.28□□□□□ -1.56
RNF43Q68DV7 Y_RNA.670-201ENST00000516255 105 ntBASIC5.28□□□□□ -1.56
RNF43Q68DV7 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.28□□□□□ -1.56
RNF43Q68DV7 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.28□□□□□ -1.56
RNF43Q68DV7 AC011979.2-201ENST00000527568 352 ntBASIC5.28□□□□□ -1.56
RNF43Q68DV7 DEFB109D-201ENST00000529497 240 ntBASIC5.28□□□□□ -1.56
RNF43Q68DV7 TOMM20P2-201ENST00000540082 421 ntBASIC5.28□□□□□ -1.56
RNF43Q68DV7 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF43Q68DV7 AC135001.1-201ENST00000544546 283 ntBASIC5.28□□□□□ -1.56
RNF43Q68DV7 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.28□□□□□ -1.56
RNF43Q68DV7 MIR4691-201ENST00000583764 85 ntBASIC5.28□□□□□ -1.56
RNF43Q68DV7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.28□□□□□ -1.56
RNF43Q68DV7 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.28□□□□□ -1.56
RNF43Q68DV7 AL021879.1-201ENST00000611756 288 ntBASIC5.28□□□□□ -1.56
RNF43Q68DV7 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF43Q68DV7 uc_338.9-201ENST00000617424 182 ntBASIC5.28□□□□□ -1.56
RNF43Q68DV7 AC011155.2-201ENST00000623202 216 ntBASIC5.28□□□□□ -1.56
RNF43Q68DV7 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.28□□□□□ -1.56
RNF43Q68DV7 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNF43Q68DV7 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF43Q68DV7 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNF43Q68DV7 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
RNF43Q68DV7 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF43Q68DV7 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RNF43Q68DV7 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF43Q68DV7 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.27□□□□□ -1.57
RNF43Q68DV7 AC233263.6-201ENST00000631132 1963 ntBASIC5.27□□□□□ -1.57
RNF43Q68DV7 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF43Q68DV7 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RNF43Q68DV7 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF43Q68DV7 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
RNF43Q68DV7 U3.11-201ENST00000364476 212 ntBASIC5.27□□□□□ -1.57
RNF43Q68DV7 SNORA20.1-201ENST00000364790 130 ntBASIC5.27□□□□□ -1.57
RNF43Q68DV7 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
RNF43Q68DV7 RNU2-22P-201ENST00000411266 212 ntBASIC5.27□□□□□ -1.57
RNF43Q68DV7 AL133384.1-201ENST00000412744 351 ntBASIC5.27□□□□□ -1.57
RNF43Q68DV7 GJA6P-201ENST00000415117 1042 ntBASIC5.27□□□□□ -1.57
RNF43Q68DV7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms