Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF220Q5VTB9 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.14□□□□□ -1.75
RNF220Q5VTB9 RNU6-314P-201ENST00000516574 104 ntBASIC4.14□□□□□ -1.75
RNF220Q5VTB9 NARSP2-201ENST00000518524 679 ntBASIC4.14□□□□□ -1.75
RNF220Q5VTB9 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.14□□□□□ -1.75
RNF220Q5VTB9 PHBP17-201ENST00000528576 541 ntBASIC4.14□□□□□ -1.75
RNF220Q5VTB9 OR5D15P-201ENST00000531671 942 ntBASIC4.14□□□□□ -1.75
RNF220Q5VTB9 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.14□□□□□ -1.75
RNF220Q5VTB9 ARL2BPP2-201ENST00000550907 489 ntBASIC4.14□□□□□ -1.75
RNF220Q5VTB9 AC124947.2-202ENST00000552735 133 ntBASIC4.14□□□□□ -1.75
RNF220Q5VTB9 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF220Q5VTB9 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.14□□□□□ -1.75
RNF220Q5VTB9 AC016180.1-201ENST00000567945 403 ntBASIC4.14□□□□□ -1.75
RNF220Q5VTB9 RPL23AP87-202ENST00000573039 466 ntBASIC4.14□□□□□ -1.75
RNF220Q5VTB9 GLUD1P4-201ENST00000590914 418 ntBASIC4.14□□□□□ -1.75
RNF220Q5VTB9 AC013244.1-201ENST00000604279 193 ntBASIC4.14□□□□□ -1.75
RNF220Q5VTB9 AC110741.2-201ENST00000605278 268 ntBASIC4.14□□□□□ -1.75
RNF220Q5VTB9 AC010133.1-201ENST00000615809 842 ntBASIC4.14□□□□□ -1.75
RNF220Q5VTB9 U4.5-201ENST00000617137 123 ntBASIC4.14□□□□□ -1.75
RNF220Q5VTB9 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RNF220Q5VTB9 AC110801.1-201ENST00000623590 212 ntBASIC4.14□□□□□ -1.75
RNF220Q5VTB9 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.14□□□□□ -1.75
RNF220Q5VTB9 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
RNF220Q5VTB9 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF220Q5VTB9 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
RNF220Q5VTB9 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF220Q5VTB9 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
RNF220Q5VTB9 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.13□□□□□ -1.75
RNF220Q5VTB9 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF220Q5VTB9 Y_RNA.1-201ENST00000352915 104 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 MIR181A1-201ENST00000385026 110 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RNF220Q5VTB9 RNU2-36P-201ENST00000410361 191 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 RHEBP3-201ENST00000411920 351 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF220Q5VTB9 UQCRBP1-201ENST00000421129 336 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.13□□□□□ -1.75
RNF220Q5VTB9 OR2AS1P-201ENST00000427827 319 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 RPL23AP93-201ENST00000440847 484 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF220Q5VTB9 SNRPGP6-201ENST00000451124 220 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 AC012671.1-201ENST00000451912 203 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 VN1R17P-201ENST00000472048 1090 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 AC023598.1-201ENST00000472521 361 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.13□□□□□ -1.75
RNF220Q5VTB9 AC069499.1-201ENST00000489433 509 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 AC079382.1-201ENST00000493346 557 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 AC106872.2-201ENST00000494303 480 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.13□□□□□ -1.75
RNF220Q5VTB9 SCARNA24.1-201ENST00000516465 137 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 RNU6-410P-201ENST00000517006 107 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF220Q5VTB9 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.13□□□□□ -1.75
RNF220Q5VTB9 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.13□□□□□ -1.75
RNF220Q5VTB9 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.13□□□□□ -1.75
RNF220Q5VTB9 SUB1P2-201ENST00000556401 297 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.13□□□□□ -1.75
RNF220Q5VTB9 RPL23AP97-201ENST00000568955 471 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 MIR3921-201ENST00000577308 85 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF220Q5VTB9 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF220Q5VTB9 AC098848.2-201ENST00000588023 330 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 AL160290.3-201ENST00000604869 165 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 AP002826.1-201ENST00000608835 315 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 AC092794.1-201ENST00000612734 582 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 SDR42E1P2-201ENST00000614861 481 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 AC008785.1-201ENST00000624475 456 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 AC009161.2-201ENST00000624626 138 ntBASIC4.13□□□□□ -1.75
RNF220Q5VTB9 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.13□□□□□ -1.75
RNF220Q5VTB9 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
RNF220Q5VTB9 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF220Q5VTB9 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.13□□□□□ -1.75
RNF220Q5VTB9 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RNF220Q5VTB9 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RNF220Q5VTB9 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 RNU5E-6P-201ENST00000365574 115 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 RNU1-39P-201ENST00000383897 165 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 MTCO3P40-201ENST00000392516 676 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 UBE2V1P10-201ENST00000414685 269 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 AC018630.2-202ENST00000422992 927 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 MTCO3P30-201ENST00000426425 670 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 ISCA1P1-201ENST00000426679 387 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 AL049745.1-201ENST00000433953 286 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 RPL12P3-201ENST00000440080 396 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.12□□□□□ -1.75
RNF220Q5VTB9 AC093899.1-201ENST00000457984 376 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 RPL38P1-201ENST00000460914 211 ntBASIC4.12□□□□□ -1.75
RNF220Q5VTB9 RPL21P104-201ENST00000464143 478 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 179.6 ms