Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 CYCSP49-201ENST00000420810 319 ntBASIC3.17□□□□□ -1.9
COL16A1Q07092 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.17□□□□□ -1.9
COL16A1Q07092 AC010486.3-201ENST00000511602 785 ntBASIC3.17□□□□□ -1.9
COL16A1Q07092 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.17□□□□□ -1.9
COL16A1Q07092 SNORA3.4-201ENST00000515969 96 ntBASIC3.17□□□□□ -1.9
COL16A1Q07092 MTCO1P47-201ENST00000523889 1271 ntBASIC3.17□□□□□ -1.9
COL16A1Q07092 HAUS1P3-201ENST00000523909 662 ntBASIC3.17□□□□□ -1.9
COL16A1Q07092 AP003717.3-201ENST00000544832 1180 ntBASIC3.17□□□□□ -1.9
COL16A1Q07092 ZNF321P-202ENST00000550843 495 ntBASIC3.17□□□□□ -1.9
COL16A1Q07092 MTND4P33-201ENST00000556706 766 ntBASIC3.17□□□□□ -1.9
COL16A1Q07092 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.17□□□□□ -1.9
COL16A1Q07092 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.17□□□□□ -1.9
COL16A1Q07092 ZNF92P3-201ENST00000596594 954 ntBASIC3.17□□□□□ -1.9
COL16A1Q07092 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.17□□□□□ -1.9
COL16A1Q07092 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.17□□□□□ -1.9
COL16A1Q07092 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.17□□□□□ -1.9
COL16A1Q07092 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL16A1Q07092 AC079416.3-201ENST00000624479 549 ntBASIC3.17□□□□□ -1.9
COL16A1Q07092 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
COL16A1Q07092 AL513185.3-201ENST00000433335 1300 ntBASIC3.16□□□□□ -1.9
COL16A1Q07092 MFSD8-213ENST00000641134 1327 ntBASIC3.16□□□□□ -1.9
COL16A1Q07092 U6.112-201ENST00000384129 70 ntBASIC3.16□□□□□ -1.9
COL16A1Q07092 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
COL16A1Q07092 SFR1P1-201ENST00000403720 688 ntBASIC3.16□□□□□ -1.9
COL16A1Q07092 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.16□□□□□ -1.9
COL16A1Q07092 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.16□□□□□ -1.9
COL16A1Q07092 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.16□□□□□ -1.9
COL16A1Q07092 UBE2D3P4-201ENST00000441973 436 ntBASIC3.16□□□□□ -1.9
COL16A1Q07092 RPS27P5-201ENST00000444247 244 ntBASIC3.16□□□□□ -1.9
COL16A1Q07092 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.16□□□□□ -1.9
COL16A1Q07092 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.16□□□□□ -1.9
COL16A1Q07092 AC126182.1-201ENST00000478134 357 ntBASIC3.16□□□□□ -1.9
COL16A1Q07092 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
COL16A1Q07092 RNU6-1231P-201ENST00000517185 103 ntBASIC3.16□□□□□ -1.9
COL16A1Q07092 MRPS36P3-201ENST00000519284 130 ntBASIC3.16□□□□□ -1.9
COL16A1Q07092 NDUFA5P6-201ENST00000542110 379 ntBASIC3.16□□□□□ -1.9
COL16A1Q07092 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.16□□□□□ -1.9
COL16A1Q07092 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.16□□□□□ -1.9
COL16A1Q07092 MIR5007-201ENST00000583098 95 ntBASIC3.16□□□□□ -1.9
COL16A1Q07092 AC061975.8-201ENST00000587058 721 ntBASIC3.16□□□□□ -1.9
COL16A1Q07092 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.16□□□□□ -1.9
COL16A1Q07092 AL022161.1-201ENST00000604390 213 ntBASIC3.16□□□□□ -1.9
COL16A1Q07092 AC107952.2-201ENST00000606048 486 ntBASIC3.16□□□□□ -1.9
COL16A1Q07092 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.16□□□□□ -1.9
COL16A1Q07092 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.16□□□□□ -1.9
COL16A1Q07092 AL606537.1-201ENST00000607258 2011 ntBASIC3.16□□□□□ -1.9
COL16A1Q07092 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
COL16A1Q07092 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.16□□□□□ -1.9
COL16A1Q07092 Y_RNA.116-201ENST00000363292 103 ntBASIC3.15□□□□□ -1.9
COL16A1Q07092 Y_RNA.318-201ENST00000365131 97 ntBASIC3.15□□□□□ -1.9
COL16A1Q07092 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.15□□□□□ -1.9
COL16A1Q07092 MIR181B1-201ENST00000385240 110 ntBASIC3.15□□□□□ -1.9
COL16A1Q07092 RNA5SP210-201ENST00000391034 120 ntBASIC3.15□□□□□ -1.9
COL16A1Q07092 AC009518.2-201ENST00000418056 731 ntBASIC3.15□□□□□ -1.9
COL16A1Q07092 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.15□□□□□ -1.9
COL16A1Q07092 AC004022.1-201ENST00000447766 1066 ntBASIC3.15□□□□□ -1.9
COL16A1Q07092 AC245517.4-201ENST00000448601 281 ntBASIC3.15□□□□□ -1.9
COL16A1Q07092 AC125238.1-201ENST00000448842 249 ntBASIC3.15□□□□□ -1.9
COL16A1Q07092 VN1R17P-201ENST00000472048 1090 ntBASIC3.15□□□□□ -1.9
COL16A1Q07092 AC004263.1-201ENST00000479327 332 ntBASIC3.15□□□□□ -1.9
COL16A1Q07092 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.15□□□□□ -1.9
COL16A1Q07092 KCTD9P5-201ENST00000504141 1170 ntBASIC3.15□□□□□ -1.9
COL16A1Q07092 AC021146.7-201ENST00000509604 775 ntBASIC3.15□□□□□ -1.9
COL16A1Q07092 AC119751.1-201ENST00000513357 765 ntBASIC3.15□□□□□ -1.9
COL16A1Q07092 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.15□□□□□ -1.9
COL16A1Q07092 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.15□□□□□ -1.9
COL16A1Q07092 AC008083.2-201ENST00000546707 476 ntBASIC3.15□□□□□ -1.9
COL16A1Q07092 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.15□□□□□ -1.9
COL16A1Q07092 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.15□□□□□ -1.9
COL16A1Q07092 AC005951.1-201ENST00000576706 485 ntBASIC3.15□□□□□ -1.9
COL16A1Q07092 MIR4644-201ENST00000579929 84 ntBASIC3.15□□□□□ -1.9
COL16A1Q07092 CBX3P2-202ENST00000583365 535 ntBASIC3.15□□□□□ -1.9
COL16A1Q07092 AC146944.4-201ENST00000602697 718 ntBASIC3.15□□□□□ -1.9
COL16A1Q07092 AL109653.1-201ENST00000603091 248 ntBASIC3.15□□□□□ -1.9
COL16A1Q07092 AL139286.1-201ENST00000604465 483 ntBASIC3.15□□□□□ -1.9
COL16A1Q07092 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.15□□□□□ -1.9
COL16A1Q07092 RMST_5.1-201ENST00000618704 126 ntBASIC3.15□□□□□ -1.9
COL16A1Q07092 AL121594.5-201ENST00000631724 573 ntBASIC3.15□□□□□ -1.9
COL16A1Q07092 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
COL16A1Q07092 MAPK10-322ENST00000641485 4530 ntBASIC3.15□□□□□ -1.91
COL16A1Q07092 Z99496.1-201ENST00000469424 1477 ntBASIC3.15□□□□□ -1.91
COL16A1Q07092 CR382285.2-201ENST00000624662 1495 ntBASIC3.15□□□□□ -1.91
COL16A1Q07092 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
COL16A1Q07092 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
COL16A1Q07092 MIR518E-201ENST00000385252 88 ntBASIC3.15□□□□□ -1.91
COL16A1Q07092 AL136310.1-201ENST00000404926 654 ntBASIC3.15□□□□□ -1.91
COL16A1Q07092 HMGB1P13-201ENST00000406019 642 ntBASIC3.15□□□□□ -1.91
COL16A1Q07092 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.15□□□□□ -1.91
COL16A1Q07092 MTND4P3-201ENST00000417829 541 ntBASIC3.15□□□□□ -1.91
COL16A1Q07092 RPS6P12-201ENST00000432491 726 ntBASIC3.15□□□□□ -1.91
COL16A1Q07092 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.15□□□□□ -1.91
COL16A1Q07092 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.15□□□□□ -1.91
COL16A1Q07092 NANOGP2-201ENST00000435391 727 ntBASIC3.15□□□□□ -1.91
COL16A1Q07092 RPL23AP74-201ENST00000437246 471 ntBASIC3.15□□□□□ -1.91
COL16A1Q07092 RPL7P54-201ENST00000438336 674 ntBASIC3.15□□□□□ -1.91
COL16A1Q07092 RPS26P30-201ENST00000443431 335 ntBASIC3.15□□□□□ -1.91
COL16A1Q07092 AL353898.1-201ENST00000444055 238 ntBASIC3.15□□□□□ -1.91
COL16A1Q07092 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.15□□□□□ -1.91
COL16A1Q07092 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.15□□□□□ -1.91
COL16A1Q07092 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms