Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 RPL21P32-201ENST00000419877 477 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 AC096632.1-201ENST00000427395 310 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 AL356320.1-201ENST00000429616 163 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.56□□□□□ -2.16
SSBP1Q04837 AC025750.2-201ENST00000442609 450 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.56□□□□□ -2.16
SSBP1Q04837 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.56□□□□□ -2.16
SSBP1Q04837 PPP1R2P5-201ENST00000457256 603 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SSBP1Q04837 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.56□□□□□ -2.16
SSBP1Q04837 SETP11-201ENST00000473027 690 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 RPL21P99-201ENST00000480369 423 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 RPL30P14-201ENST00000482744 348 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 RPL23AP70-201ENST00000483361 460 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 AC034222.1-201ENST00000494052 532 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.56□□□□□ -2.16
SSBP1Q04837 AC016550.3-201ENST00000515706 767 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.56□□□□□ -2.16
SSBP1Q04837 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.56□□□□□ -2.16
SSBP1Q04837 AC083923.1-201ENST00000523708 376 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 AP003122.3-201ENST00000526316 255 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 NDUFS5P6-201ENST00000529136 295 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC1.56□□□□□ -2.16
SSBP1Q04837 AC087481.2-201ENST00000565492 330 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 AC090897.2-201ENST00000581715 130 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.56□□□□□ -2.16
SSBP1Q04837 AC110079.1-202ENST00000635213 138 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 MTND4P31-201ENST00000425607 1343 ntBASIC1.56□□□□□ -2.16
SSBP1Q04837 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
SSBP1Q04837 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
SSBP1Q04837 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
SSBP1Q04837 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC1.55□□□□□ -2.16
SSBP1Q04837 GNG5P1-201ENST00000255500 204 ntBASIC1.55□□□□□ -2.16
SSBP1Q04837 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.55□□□□□ -2.16
SSBP1Q04837 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.55□□□□□ -2.16
SSBP1Q04837 RNU6-1072P-201ENST00000384703 107 ntBASIC1.55□□□□□ -2.16
SSBP1Q04837 RNU6-443P-201ENST00000384780 107 ntBASIC1.55□□□□□ -2.16
SSBP1Q04837 MIR524-201ENST00000385242 87 ntBASIC1.55□□□□□ -2.16
SSBP1Q04837 RNU4-72P-201ENST00000410754 173 ntBASIC1.55□□□□□ -2.16
SSBP1Q04837 RNU4-78P-201ENST00000410940 126 ntBASIC1.55□□□□□ -2.16
SSBP1Q04837 AL513331.1-201ENST00000411908 397 ntBASIC1.55□□□□□ -2.16
SSBP1Q04837 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SSBP1Q04837 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.55□□□□□ -2.16
SSBP1Q04837 AL445646.1-201ENST00000431784 216 ntBASIC1.55□□□□□ -2.16
SSBP1Q04837 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.55□□□□□ -2.16
SSBP1Q04837 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.55□□□□□ -2.16
SSBP1Q04837 AC104689.1-201ENST00000473356 768 ntBASIC1.55□□□□□ -2.16
SSBP1Q04837 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC1.55□□□□□ -2.16
SSBP1Q04837 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.55□□□□□ -2.16
SSBP1Q04837 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.55□□□□□ -2.16
SSBP1Q04837 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SSBP1Q04837 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.55□□□□□ -2.16
SSBP1Q04837 OR4G1P-201ENST00000588632 938 ntBASIC1.55□□□□□ -2.16
SSBP1Q04837 RPS15AP11-201ENST00000594193 385 ntBASIC1.55□□□□□ -2.16
SSBP1Q04837 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.55□□□□□ -2.16
SSBP1Q04837 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.55□□□□□ -2.16
SSBP1Q04837 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.55□□□□□ -2.16
SSBP1Q04837 AC005000.2-201ENST00000605468 310 ntBASIC1.55□□□□□ -2.16
SSBP1Q04837 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC1.55□□□□□ -2.16
SSBP1Q04837 AL138880.2-201ENST00000616214 239 ntBASIC1.55□□□□□ -2.16
SSBP1Q04837 YWHAEP7-203ENST00000622054 312 ntBASIC1.55□□□□□ -2.16
SSBP1Q04837 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SSBP1Q04837 RNA5SP289-201ENST00000362332 137 ntBASIC1.54□□□□□ -2.16
SSBP1Q04837 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.54□□□□□ -2.16
SSBP1Q04837 RNU6-31P-201ENST00000384388 108 ntBASIC1.54□□□□□ -2.16
SSBP1Q04837 RNU6-452P-201ENST00000384406 107 ntBASIC1.54□□□□□ -2.16
SSBP1Q04837 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SSBP1Q04837 RNU6-837P-201ENST00000391056 108 ntBASIC1.54□□□□□ -2.16
SSBP1Q04837 RPS4XP3-201ENST00000398541 413 ntBASIC1.54□□□□□ -2.16
SSBP1Q04837 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.54□□□□□ -2.16
SSBP1Q04837 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SSBP1Q04837 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.54□□□□□ -2.16
SSBP1Q04837 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.54□□□□□ -2.16
SSBP1Q04837 MTCO1P45-201ENST00000431457 267 ntBASIC1.54□□□□□ -2.16
SSBP1Q04837 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.54□□□□□ -2.16
SSBP1Q04837 AL645638.1-201ENST00000440519 361 ntBASIC1.54□□□□□ -2.16
SSBP1Q04837 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.54□□□□□ -2.16
SSBP1Q04837 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SSBP1Q04837 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.54□□□□□ -2.16
SSBP1Q04837 RPL23AP41-201ENST00000484754 458 ntBASIC1.54□□□□□ -2.16
SSBP1Q04837 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.54□□□□□ -2.16
SSBP1Q04837 AC025768.1-201ENST00000510057 267 ntBASIC1.54□□□□□ -2.16
SSBP1Q04837 AC108120.2-201ENST00000512973 294 ntBASIC1.54□□□□□ -2.16
SSBP1Q04837 RNU4-18P-201ENST00000516751 149 ntBASIC1.54□□□□□ -2.16
SSBP1Q04837 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.54□□□□□ -2.16
SSBP1Q04837 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.54□□□□□ -2.16
SSBP1Q04837 AP005435.4-201ENST00000529514 284 ntBASIC1.54□□□□□ -2.16
SSBP1Q04837 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.54□□□□□ -2.16
SSBP1Q04837 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.54□□□□□ -2.16
SSBP1Q04837 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.54□□□□□ -2.16
SSBP1Q04837 AC053481.3-201ENST00000577881 843 ntBASIC1.54□□□□□ -2.16
SSBP1Q04837 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.54□□□□□ -2.16
SSBP1Q04837 AC017100.2-201ENST00000584628 355 ntBASIC1.54□□□□□ -2.16
SSBP1Q04837 AC008749.1-201ENST00000597650 306 ntBASIC1.54□□□□□ -2.16
SSBP1Q04837 XIAPP1-201ENST00000603162 600 ntBASIC1.54□□□□□ -2.16
SSBP1Q04837 AL009028.1-201ENST00000604895 802 ntBASIC1.54□□□□□ -2.16
SSBP1Q04837 BNIP3P7-201ENST00000605641 516 ntBASIC1.54□□□□□ -2.16
SSBP1Q04837 AC026790.2-201ENST00000606282 430 ntBASIC1.54□□□□□ -2.16
SSBP1Q04837 BX323046.1-201ENST00000610145 535 ntBASIC1.54□□□□□ -2.16
SSBP1Q04837 AC024023.1-201ENST00000624530 922 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms