Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RNU6-1226P-201ENST00000384317 107 ntBASIC4.73□□□□□ -1.65
YBX1P67809 SNORD3H-201ENST00000384486 214 ntBASIC4.73□□□□□ -1.65
YBX1P67809 RNU6-146P-201ENST00000384602 108 ntBASIC4.73□□□□□ -1.65
YBX1P67809 VDAC1P9-201ENST00000412766 841 ntBASIC4.73□□□□□ -1.65
YBX1P67809 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.73□□□□□ -1.65
YBX1P67809 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.73□□□□□ -1.65
YBX1P67809 SKA2P1-201ENST00000425592 390 ntBASIC4.73□□□□□ -1.65
YBX1P67809 AC234779.1-201ENST00000425910 285 ntBASIC4.73□□□□□ -1.65
YBX1P67809 AC096644.2-201ENST00000429278 159 ntBASIC4.73□□□□□ -1.65
YBX1P67809 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.73□□□□□ -1.65
YBX1P67809 EEF1A1P1-201ENST00000447052 739 ntBASIC4.73□□□□□ -1.65
YBX1P67809 AC010733.1-201ENST00000451515 401 ntBASIC4.73□□□□□ -1.65
YBX1P67809 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.73□□□□□ -1.65
YBX1P67809 AC079804.1-201ENST00000461922 436 ntBASIC4.73□□□□□ -1.65
YBX1P67809 AL591473.1-201ENST00000464297 313 ntBASIC4.73□□□□□ -1.65
YBX1P67809 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.73□□□□□ -1.65
YBX1P67809 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.73□□□□□ -1.65
YBX1P67809 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.73□□□□□ -1.65
YBX1P67809 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.73□□□□□ -1.65
YBX1P67809 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.73□□□□□ -1.65
YBX1P67809 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.73□□□□□ -1.65
YBX1P67809 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.73□□□□□ -1.65
YBX1P67809 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
YBX1P67809 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.73□□□□□ -1.65
YBX1P67809 MYL12BP1-201ENST00000569826 507 ntBASIC4.73□□□□□ -1.65
YBX1P67809 MIR4480-201ENST00000582492 71 ntBASIC4.73□□□□□ -1.65
YBX1P67809 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.73□□□□□ -1.65
YBX1P67809 AC020910.3-201ENST00000603701 874 ntBASIC4.73□□□□□ -1.65
YBX1P67809 AC092747.3-201ENST00000603769 301 ntBASIC4.73□□□□□ -1.65
YBX1P67809 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.73□□□□□ -1.65
YBX1P67809 MIR378J-201ENST00000611988 109 ntBASIC4.73□□□□□ -1.65
YBX1P67809 AC007485.1-201ENST00000616755 206 ntBASIC4.73□□□□□ -1.65
YBX1P67809 AL162373.1-201ENST00000620433 407 ntBASIC4.73□□□□□ -1.65
YBX1P67809 AC011155.2-201ENST00000623202 216 ntBASIC4.73□□□□□ -1.65
YBX1P67809 AL353662.3-201ENST00000625131 237 ntBASIC4.73□□□□□ -1.65
YBX1P67809 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
YBX1P67809 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
YBX1P67809 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
YBX1P67809 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
YBX1P67809 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
YBX1P67809 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
YBX1P67809 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
YBX1P67809 AC093591.2-201ENST00000565254 3843 ntBASIC4.73□□□□□ -1.65
YBX1P67809 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
YBX1P67809 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
YBX1P67809 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
YBX1P67809 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
YBX1P67809 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.72□□□□□ -1.65
YBX1P67809 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
YBX1P67809 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
YBX1P67809 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
YBX1P67809 Y_RNA.364-201ENST00000365532 101 ntBASIC4.72□□□□□ -1.65
YBX1P67809 RNU6-1040P-201ENST00000383974 107 ntBASIC4.72□□□□□ -1.65
YBX1P67809 AL592291.1-201ENST00000403830 352 ntBASIC4.72□□□□□ -1.65
YBX1P67809 Y_RNA.646-201ENST00000410980 101 ntBASIC4.72□□□□□ -1.65
YBX1P67809 RNU6-954P-201ENST00000411355 107 ntBASIC4.72□□□□□ -1.65
YBX1P67809 AC069218.2-201ENST00000411665 344 ntBASIC4.72□□□□□ -1.65
YBX1P67809 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.72□□□□□ -1.65
YBX1P67809 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.72□□□□□ -1.65
YBX1P67809 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.72□□□□□ -1.65
YBX1P67809 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.72□□□□□ -1.65
YBX1P67809 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.72□□□□□ -1.65
YBX1P67809 EIF4HP2-201ENST00000424380 563 ntBASIC4.72□□□□□ -1.65
YBX1P67809 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.72□□□□□ -1.65
YBX1P67809 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
YBX1P67809 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.72□□□□□ -1.65
YBX1P67809 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.72□□□□□ -1.65
YBX1P67809 RNA5SP103-201ENST00000459503 118 ntBASIC4.72□□□□□ -1.65
YBX1P67809 RPS3AP41-201ENST00000462701 778 ntBASIC4.72□□□□□ -1.65
YBX1P67809 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.72□□□□□ -1.65
YBX1P67809 RN7SL346P-201ENST00000491561 294 ntBASIC4.72□□□□□ -1.65
YBX1P67809 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.72□□□□□ -1.65
YBX1P67809 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
YBX1P67809 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.72□□□□□ -1.65
YBX1P67809 MRPS35P2-201ENST00000508242 191 ntBASIC4.72□□□□□ -1.65
YBX1P67809 Y_RNA.661-201ENST00000516003 99 ntBASIC4.72□□□□□ -1.65
YBX1P67809 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.72□□□□□ -1.65
YBX1P67809 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
YBX1P67809 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.72□□□□□ -1.65
YBX1P67809 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.72□□□□□ -1.65
YBX1P67809 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.72□□□□□ -1.65
YBX1P67809 AL049839.1-201ENST00000556151 657 ntBASIC4.72□□□□□ -1.65
YBX1P67809 MTCO3P23-201ENST00000561363 289 ntBASIC4.72□□□□□ -1.65
YBX1P67809 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.72□□□□□ -1.65
YBX1P67809 RNF138P2-201ENST00000603490 592 ntBASIC4.72□□□□□ -1.65
YBX1P67809 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.72□□□□□ -1.65
YBX1P67809 MIR8069-1-201ENST00000616627 86 ntBASIC4.72□□□□□ -1.65
YBX1P67809 MIR8069-2-201ENST00000621412 86 ntBASIC4.72□□□□□ -1.65
YBX1P67809 AP000346.3-201ENST00000622821 210 ntBASIC4.72□□□□□ -1.65
YBX1P67809 AL669831.3-213ENST00000636676 183 ntBASIC4.72□□□□□ -1.65
YBX1P67809 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
YBX1P67809 SAMMSON-226ENST00000642089 1582 ntBASIC4.72□□□□□ -1.65
YBX1P67809 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
YBX1P67809 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
YBX1P67809 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
YBX1P67809 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
YBX1P67809 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.72□□□□□ -1.65
YBX1P67809 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
YBX1P67809 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.72□□□□□ -1.65
YBX1P67809 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 187.7 ms