Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.67□□□□□ -1.98
VSX2P58304 AC023043.3-201ENST00000593113 385 ntBASIC2.67□□□□□ -1.98
VSX2P58304 DUXAP4-201ENST00000603046 613 ntBASIC2.67□□□□□ -1.98
VSX2P58304 AC068831.7-201ENST00000616954 363 ntBASIC2.67□□□□□ -1.98
VSX2P58304 AL512427.1-201ENST00000618593 349 ntBASIC2.67□□□□□ -1.98
VSX2P58304 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.67□□□□□ -1.98
VSX2P58304 AC095031.1-201ENST00000623685 672 ntBASIC2.67□□□□□ -1.98
VSX2P58304 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VSX2P58304 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.67□□□□□ -1.98
VSX2P58304 ASNSP3-201ENST00000451989 1306 ntBASIC2.67□□□□□ -1.98
VSX2P58304 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
VSX2P58304 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VSX2P58304 RNU6-50P-201ENST00000362356 103 ntBASIC2.66□□□□□ -1.98
VSX2P58304 RNU6-707P-201ENST00000364647 95 ntBASIC2.66□□□□□ -1.98
VSX2P58304 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
VSX2P58304 MIR181A2-201ENST00000384863 110 ntBASIC2.66□□□□□ -1.98
VSX2P58304 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
VSX2P58304 RNU6-1300P-201ENST00000391046 108 ntBASIC2.66□□□□□ -1.98
VSX2P58304 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
VSX2P58304 RNU2-28P-201ENST00000410457 189 ntBASIC2.66□□□□□ -1.98
VSX2P58304 RNA5SP492-201ENST00000411330 114 ntBASIC2.66□□□□□ -1.98
VSX2P58304 AC069282.1-201ENST00000411911 526 ntBASIC2.66□□□□□ -1.98
VSX2P58304 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.66□□□□□ -1.98
VSX2P58304 ATG3P1-201ENST00000419507 911 ntBASIC2.66□□□□□ -1.98
VSX2P58304 AC233728.2-201ENST00000425348 757 ntBASIC2.66□□□□□ -1.98
VSX2P58304 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.66□□□□□ -1.98
VSX2P58304 MTCO1P48-201ENST00000448024 1096 ntBASIC2.66□□□□□ -1.98
VSX2P58304 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.66□□□□□ -1.98
VSX2P58304 AC004924.1-201ENST00000480160 781 ntBASIC2.66□□□□□ -1.98
VSX2P58304 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.66□□□□□ -1.98
VSX2P58304 OR4G11P-201ENST00000492842 939 ntBASIC2.66□□□□□ -1.98
VSX2P58304 CBX3P3-201ENST00000508108 532 ntBASIC2.66□□□□□ -1.98
VSX2P58304 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.66□□□□□ -1.98
VSX2P58304 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.66□□□□□ -1.98
VSX2P58304 RNA5SP468-201ENST00000516782 93 ntBASIC2.66□□□□□ -1.98
VSX2P58304 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.66□□□□□ -1.98
VSX2P58304 AC104417.1-201ENST00000523974 751 ntBASIC2.66□□□□□ -1.98
VSX2P58304 SNRPGP16-201ENST00000533275 226 ntBASIC2.66□□□□□ -1.98
VSX2P58304 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
VSX2P58304 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.66□□□□□ -1.98
VSX2P58304 AC087897.1-201ENST00000550134 156 ntBASIC2.66□□□□□ -1.98
VSX2P58304 EEF1B2P4-201ENST00000551398 348 ntBASIC2.66□□□□□ -1.98
VSX2P58304 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
VSX2P58304 ZNF861P-201ENST00000588126 639 ntBASIC2.66□□□□□ -1.98
VSX2P58304 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.66□□□□□ -1.98
VSX2P58304 VN1R90P-201ENST00000595717 726 ntBASIC2.66□□□□□ -1.98
VSX2P58304 AC090115.4-201ENST00000609970 188 ntBASIC2.66□□□□□ -1.98
VSX2P58304 AL359198.2-201ENST00000611836 194 ntBASIC2.66□□□□□ -1.98
VSX2P58304 AL355493.4-201ENST00000618530 292 ntBASIC2.66□□□□□ -1.98
VSX2P58304 AC010338.1-201ENST00000621823 717 ntBASIC2.66□□□□□ -1.98
VSX2P58304 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.66□□□□□ -1.98
VSX2P58304 MTCO1P23-201ENST00000415223 1526 ntBASIC2.66□□□□□ -1.98
VSX2P58304 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VSX2P58304 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VSX2P58304 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VSX2P58304 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
VSX2P58304 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.66□□□□□ -1.98
VSX2P58304 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
VSX2P58304 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VSX2P58304 SUGT1P1-201ENST00000379514 476 ntBASIC2.65□□□□□ -1.99
VSX2P58304 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
VSX2P58304 AL138827.1-201ENST00000402666 306 ntBASIC2.65□□□□□ -1.99
VSX2P58304 SNORD88.1-201ENST00000408684 91 ntBASIC2.65□□□□□ -1.99
VSX2P58304 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.65□□□□□ -1.99
VSX2P58304 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.65□□□□□ -1.99
VSX2P58304 RPS7P9-201ENST00000414704 586 ntBASIC2.65□□□□□ -1.99
VSX2P58304 AL451074.5-201ENST00000415894 435 ntBASIC2.65□□□□□ -1.99
VSX2P58304 PSMA6P3-201ENST00000428242 164 ntBASIC2.65□□□□□ -1.99
VSX2P58304 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.65□□□□□ -1.99
VSX2P58304 SEPT7P5-201ENST00000434048 306 ntBASIC2.65□□□□□ -1.99
VSX2P58304 MTND4LP10-201ENST00000435146 291 ntBASIC2.65□□□□□ -1.99
VSX2P58304 ARF4P4-201ENST00000439608 520 ntBASIC2.65□□□□□ -1.99
VSX2P58304 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.65□□□□□ -1.99
VSX2P58304 GSTA11P-201ENST00000452866 669 ntBASIC2.65□□□□□ -1.99
VSX2P58304 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.65□□□□□ -1.99
VSX2P58304 AC104472.2-201ENST00000469035 601 ntBASIC2.65□□□□□ -1.99
VSX2P58304 VN1R104P-201ENST00000505115 1009 ntBASIC2.65□□□□□ -1.99
VSX2P58304 AC098799.2-201ENST00000509466 868 ntBASIC2.65□□□□□ -1.99
VSX2P58304 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.65□□□□□ -1.99
VSX2P58304 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.65□□□□□ -1.99
VSX2P58304 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.65□□□□□ -1.99
VSX2P58304 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VSX2P58304 HSPE1P20-201ENST00000538133 289 ntBASIC2.65□□□□□ -1.99
VSX2P58304 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.65□□□□□ -1.99
VSX2P58304 AC079600.2-201ENST00000550076 130 ntBASIC2.65□□□□□ -1.99
VSX2P58304 AADACP1-206ENST00000561502 1193 ntBASIC2.65□□□□□ -1.99
VSX2P58304 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.65□□□□□ -1.99
VSX2P58304 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.65□□□□□ -1.99
VSX2P58304 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.65□□□□□ -1.99
VSX2P58304 VN1R87P-201ENST00000596706 487 ntBASIC2.65□□□□□ -1.99
VSX2P58304 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.65□□□□□ -1.99
VSX2P58304 AC124016.2-201ENST00000610058 665 ntBASIC2.65□□□□□ -1.99
VSX2P58304 AL592148.2-201ENST00000612210 372 ntBASIC2.65□□□□□ -1.99
VSX2P58304 AL360181.4-201ENST00000621752 134 ntBASIC2.65□□□□□ -1.99
VSX2P58304 AP000943.4-201ENST00000622912 357 ntBASIC2.65□□□□□ -1.99
VSX2P58304 AC007998.5-201ENST00000622938 237 ntBASIC2.65□□□□□ -1.99
VSX2P58304 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.65□□□□□ -1.99
VSX2P58304 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VSX2P58304 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
VSX2P58304 AC092447.7-201ENST00000422212 1621 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms