Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
LIMK2P53671 RNU6-600P-201ENST00000362524 99 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 SNORD56.3-201ENST00000363507 71 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 SNORA38.1-201ENST00000364172 131 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 RNU6-1181P-201ENST00000384191 106 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 RNU6-1122P-201ENST00000384449 107 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.33□□□□□ -1.88
LIMK2P53671 RNU6-757P-201ENST00000410334 100 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.33□□□□□ -1.88
LIMK2P53671 MTND4P20-201ENST00000424125 869 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.33□□□□□ -1.88
LIMK2P53671 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.33□□□□□ -1.88
LIMK2P53671 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.33□□□□□ -1.88
LIMK2P53671 YWHAZP7-201ENST00000436906 631 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.33□□□□□ -1.88
LIMK2P53671 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.33□□□□□ -1.88
LIMK2P53671 MTND1P29-201ENST00000448112 647 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 AC125238.1-201ENST00000448842 249 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.33□□□□□ -1.88
LIMK2P53671 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.33□□□□□ -1.88
LIMK2P53671 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LIMK2P53671 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.33□□□□□ -1.88
LIMK2P53671 TRGVB-201ENST00000453257 471 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 RPL21P134-201ENST00000453468 483 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 RNU7-125P-201ENST00000458760 62 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 HMGB1P25-201ENST00000468402 607 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.33□□□□□ -1.88
LIMK2P53671 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LIMK2P53671 AC091435.1-201ENST00000505442 584 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 AC021146.8-201ENST00000507455 733 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 TXNP6-201ENST00000510190 310 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 FCF1P8-201ENST00000510322 597 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.33□□□□□ -1.88
LIMK2P53671 AC116353.3-201ENST00000511215 249 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 AC026412.2-201ENST00000512270 1075 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 RNU6-27P-201ENST00000516146 107 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 AC093331.1-201ENST00000521474 169 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.33□□□□□ -1.88
LIMK2P53671 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.33□□□□□ -1.88
LIMK2P53671 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LIMK2P53671 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.33□□□□□ -1.88
LIMK2P53671 AL121603.1-201ENST00000553815 142 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.33□□□□□ -1.88
LIMK2P53671 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.33□□□□□ -1.88
LIMK2P53671 MTCYBP33-201ENST00000575007 1130 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.33□□□□□ -1.88
LIMK2P53671 AL031281.1-201ENST00000604049 488 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 AL451074.6-201ENST00000608512 729 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 AC006023.2-201ENST00000609916 167 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.33□□□□□ -1.88
LIMK2P53671 AC079248.2-201ENST00000623779 326 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.33□□□□□ -1.88
LIMK2P53671 ZNF542P-204ENST00000482727 1305 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.33□□□□□ -1.88
LIMK2P53671 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LIMK2P53671 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
LIMK2P53671 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LIMK2P53671 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LIMK2P53671 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LIMK2P53671 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LIMK2P53671 RPL7P26-201ENST00000333817 754 ntBASIC3.32□□□□□ -1.88
LIMK2P53671 Z92545.1-201ENST00000411782 234 ntBASIC3.32□□□□□ -1.88
LIMK2P53671 BX323014.1-201ENST00000412876 237 ntBASIC3.32□□□□□ -1.88
LIMK2P53671 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LIMK2P53671 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LIMK2P53671 RAD23BP2-201ENST00000416003 1207 ntBASIC3.32□□□□□ -1.88
LIMK2P53671 MTCO3P12-201ENST00000416718 547 ntBASIC3.32□□□□□ -1.88
LIMK2P53671 ZNF885P-201ENST00000420174 1098 ntBASIC3.32□□□□□ -1.88
LIMK2P53671 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.32□□□□□ -1.88
LIMK2P53671 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.32□□□□□ -1.88
LIMK2P53671 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.32□□□□□ -1.88
LIMK2P53671 VDAC1P3-201ENST00000434069 851 ntBASIC3.32□□□□□ -1.88
LIMK2P53671 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.32□□□□□ -1.88
LIMK2P53671 THAP5P1-201ENST00000439089 262 ntBASIC3.32□□□□□ -1.88
LIMK2P53671 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.32□□□□□ -1.88
LIMK2P53671 AC118469.1-201ENST00000442943 488 ntBASIC3.32□□□□□ -1.88
LIMK2P53671 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.32□□□□□ -1.88
LIMK2P53671 MTND2P4-201ENST00000445034 1004 ntBASIC3.32□□□□□ -1.88
LIMK2P53671 Z99127.3-201ENST00000448158 395 ntBASIC3.32□□□□□ -1.88
LIMK2P53671 RPS27AP8-201ENST00000452665 445 ntBASIC3.32□□□□□ -1.88
LIMK2P53671 BTF3P5-201ENST00000457252 467 ntBASIC3.32□□□□□ -1.88
LIMK2P53671 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.32□□□□□ -1.88
LIMK2P53671 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.32□□□□□ -1.88
LIMK2P53671 AC114981.1-201ENST00000503897 678 ntBASIC3.32□□□□□ -1.88
LIMK2P53671 AC111000.2-201ENST00000507775 550 ntBASIC3.32□□□□□ -1.88
LIMK2P53671 AC079395.1-201ENST00000510981 262 ntBASIC3.32□□□□□ -1.88
LIMK2P53671 AC010625.1-201ENST00000511296 403 ntBASIC3.32□□□□□ -1.88
LIMK2P53671 RNU1-143P-201ENST00000516296 146 ntBASIC3.32□□□□□ -1.88
LIMK2P53671 SNORA31.20-201ENST00000517111 133 ntBASIC3.32□□□□□ -1.88
LIMK2P53671 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.32□□□□□ -1.88
LIMK2P53671 HSPA8P13-201ENST00000523715 472 ntBASIC3.32□□□□□ -1.88
LIMK2P53671 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.32□□□□□ -1.88
LIMK2P53671 HIGD1AP10-201ENST00000527837 282 ntBASIC3.32□□□□□ -1.88
LIMK2P53671 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.32□□□□□ -1.88
LIMK2P53671 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.32□□□□□ -1.88
LIMK2P53671 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.32□□□□□ -1.88
LIMK2P53671 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LIMK2P53671 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms