Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
COPAP53621 RNY4P34-201ENST00000364779 95 ntBASIC4.22□□□□□ -1.73
COPAP53621 AL583834.1-201ENST00000406943 343 ntBASIC4.22□□□□□ -1.73
COPAP53621 RNU6-712P-201ENST00000410558 100 ntBASIC4.22□□□□□ -1.73
COPAP53621 AC017083.1-201ENST00000428093 483 ntBASIC4.22□□□□□ -1.73
COPAP53621 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.22□□□□□ -1.73
COPAP53621 MTATP6P13-201ENST00000438531 667 ntBASIC4.22□□□□□ -1.73
COPAP53621 HMGB1P12-201ENST00000438594 598 ntBASIC4.22□□□□□ -1.73
COPAP53621 MTND6P13-201ENST00000443510 523 ntBASIC4.22□□□□□ -1.73
COPAP53621 MTND1P1-201ENST00000445453 368 ntBASIC4.22□□□□□ -1.73
COPAP53621 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.22□□□□□ -1.73
COPAP53621 RPL23AP62-201ENST00000463396 453 ntBASIC4.22□□□□□ -1.73
COPAP53621 RPS29P19-201ENST00000479709 171 ntBASIC4.22□□□□□ -1.73
COPAP53621 MTND1P3-201ENST00000484956 952 ntBASIC4.22□□□□□ -1.73
COPAP53621 VN1R105P-201ENST00000486595 910 ntBASIC4.22□□□□□ -1.73
COPAP53621 SLC25A15P5-201ENST00000508033 253 ntBASIC4.22□□□□□ -1.73
COPAP53621 FTH1P21-201ENST00000512179 511 ntBASIC4.22□□□□□ -1.73
COPAP53621 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.22□□□□□ -1.73
COPAP53621 OR5G4P-201ENST00000525251 760 ntBASIC4.22□□□□□ -1.73
COPAP53621 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.22□□□□□ -1.73
COPAP53621 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.22□□□□□ -1.73
COPAP53621 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.22□□□□□ -1.73
COPAP53621 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.22□□□□□ -1.73
COPAP53621 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.22□□□□□ -1.73
COPAP53621 AC123904.2-201ENST00000548059 300 ntBASIC4.22□□□□□ -1.73
COPAP53621 AC126177.3-201ENST00000551839 688 ntBASIC4.22□□□□□ -1.73
COPAP53621 AC087883.1-201ENST00000551882 391 ntBASIC4.22□□□□□ -1.73
COPAP53621 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.22□□□□□ -1.73
COPAP53621 AC136619.2-201ENST00000563361 631 ntBASIC4.22□□□□□ -1.73
COPAP53621 AC012182.1-201ENST00000570133 895 ntBASIC4.22□□□□□ -1.73
COPAP53621 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.22□□□□□ -1.73
COPAP53621 AC053481.4-201ENST00000583164 216 ntBASIC4.22□□□□□ -1.73
COPAP53621 UBE2L4-201ENST00000587688 464 ntBASIC4.22□□□□□ -1.73
COPAP53621 HMGN1P30-201ENST00000589286 268 ntBASIC4.22□□□□□ -1.73
COPAP53621 CKS1BP3-201ENST00000600888 237 ntBASIC4.22□□□□□ -1.73
COPAP53621 AC121334.2-201ENST00000605387 271 ntBASIC4.22□□□□□ -1.73
COPAP53621 RNU6-87P-201ENST00000607561 108 ntBASIC4.22□□□□□ -1.73
COPAP53621 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.22□□□□□ -1.73
COPAP53621 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.22□□□□□ -1.73
COPAP53621 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
COPAP53621 AL158801.5-201ENST00000623123 465 ntBASIC4.22□□□□□ -1.73
COPAP53621 AC034229.5-201ENST00000624258 185 ntBASIC4.22□□□□□ -1.73
COPAP53621 AC110994.2-201ENST00000635481 492 ntBASIC4.22□□□□□ -1.73
COPAP53621 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
COPAP53621 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COPAP53621 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
COPAP53621 MTND5P26-201ENST00000426018 1752 ntBASIC4.22□□□□□ -1.73
COPAP53621 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
COPAP53621 AC009902.3-201ENST00000606235 2172 ntBASIC4.21□□□□□ -1.73
COPAP53621 AP001148.1-201ENST00000624124 2359 ntBASIC4.21□□□□□ -1.73
COPAP53621 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
COPAP53621 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
COPAP53621 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COPAP53621 MRPL42P2-201ENST00000403169 426 ntBASIC4.21□□□□□ -1.74
COPAP53621 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.21□□□□□ -1.74
COPAP53621 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.21□□□□□ -1.74
COPAP53621 AL353777.1-201ENST00000425552 326 ntBASIC4.21□□□□□ -1.74
COPAP53621 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.21□□□□□ -1.74
COPAP53621 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.21□□□□□ -1.74
COPAP53621 RPL23AP46-201ENST00000438548 490 ntBASIC4.21□□□□□ -1.74
COPAP53621 NANOGNBP1-201ENST00000448444 480 ntBASIC4.21□□□□□ -1.74
COPAP53621 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.21□□□□□ -1.74
COPAP53621 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.21□□□□□ -1.74
COPAP53621 HMGB3P22-202ENST00000451823 572 ntBASIC4.21□□□□□ -1.74
COPAP53621 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.21□□□□□ -1.74
COPAP53621 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.21□□□□□ -1.74
COPAP53621 AC093899.1-201ENST00000457984 376 ntBASIC4.21□□□□□ -1.74
COPAP53621 AC078785.3-201ENST00000476607 425 ntBASIC4.21□□□□□ -1.74
COPAP53621 RPS4XP13-201ENST00000483219 789 ntBASIC4.21□□□□□ -1.74
COPAP53621 RPL23AP41-201ENST00000484754 458 ntBASIC4.21□□□□□ -1.74
COPAP53621 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.21□□□□□ -1.74
COPAP53621 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.21□□□□□ -1.74
COPAP53621 RNU6-528P-201ENST00000516926 100 ntBASIC4.21□□□□□ -1.74
COPAP53621 MTCYBP41-201ENST00000528913 1123 ntBASIC4.21□□□□□ -1.74
COPAP53621 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COPAP53621 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.21□□□□□ -1.74
COPAP53621 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.21□□□□□ -1.74
COPAP53621 AC022655.2-201ENST00000577280 318 ntBASIC4.21□□□□□ -1.74
COPAP53621 MIR3913-1-201ENST00000577744 102 ntBASIC4.21□□□□□ -1.74
COPAP53621 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.21□□□□□ -1.74
COPAP53621 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.21□□□□□ -1.74
COPAP53621 AC068790.3-201ENST00000602988 553 ntBASIC4.21□□□□□ -1.74
COPAP53621 AC012669.1-201ENST00000603209 283 ntBASIC4.21□□□□□ -1.74
COPAP53621 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COPAP53621 AC095031.1-201ENST00000623685 672 ntBASIC4.21□□□□□ -1.74
COPAP53621 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.21□□□□□ -1.74
COPAP53621 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.21□□□□□ -1.74
COPAP53621 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.21□□□□□ -1.74
COPAP53621 OR5AK4P-201ENST00000635912 903 ntBASIC4.21□□□□□ -1.74
COPAP53621 FARSBP1-201ENST00000435808 1778 ntBASIC4.21□□□□□ -1.74
COPAP53621 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COPAP53621 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
COPAP53621 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COPAP53621 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.21□□□□□ -1.74
COPAP53621 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COPAP53621 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
COPAP53621 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
COPAP53621 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COPAP53621 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.2□□□□□ -1.74
COPAP53621 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms