Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.82□□□□□ -1.8
CLCN3P51790 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.82□□□□□ -1.8
CLCN3P51790 AC106872.3-201ENST00000495104 446 ntBASIC3.82□□□□□ -1.8
CLCN3P51790 AC022447.3-201ENST00000506865 495 ntBASIC3.82□□□□□ -1.8
CLCN3P51790 MTND5P4-201ENST00000514978 288 ntBASIC3.82□□□□□ -1.8
CLCN3P51790 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.82□□□□□ -1.8
CLCN3P51790 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.82□□□□□ -1.8
CLCN3P51790 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLCN3P51790 AC024224.1-201ENST00000538284 609 ntBASIC3.82□□□□□ -1.8
CLCN3P51790 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.82□□□□□ -1.8
CLCN3P51790 AC012414.6-201ENST00000568241 401 ntBASIC3.82□□□□□ -1.8
CLCN3P51790 AGGF1P4-201ENST00000568249 801 ntBASIC3.82□□□□□ -1.8
CLCN3P51790 AC141257.3-201ENST00000572906 215 ntBASIC3.82□□□□□ -1.8
CLCN3P51790 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.82□□□□□ -1.8
CLCN3P51790 AC067852.3-201ENST00000589177 561 ntBASIC3.82□□□□□ -1.8
CLCN3P51790 AC073544.2-201ENST00000601155 540 ntBASIC3.82□□□□□ -1.8
CLCN3P51790 AC080078.2-201ENST00000603766 501 ntBASIC3.82□□□□□ -1.8
CLCN3P51790 AC004492.1-201ENST00000607036 742 ntBASIC3.82□□□□□ -1.8
CLCN3P51790 AC092656.1-203ENST00000624134 423 ntBASIC3.82□□□□□ -1.8
CLCN3P51790 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.82□□□□□ -1.8
CLCN3P51790 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CLCN3P51790 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
CLCN3P51790 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLCN3P51790 AC092447.10-201ENST00000620607 1652 ntBASIC3.81□□□□□ -1.8
CLCN3P51790 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLCN3P51790 AL049780.3-201ENST00000624612 1583 ntBASIC3.81□□□□□ -1.8
CLCN3P51790 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLCN3P51790 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.81□□□□□ -1.8
CLCN3P51790 RNA5SP258-201ENST00000362750 119 ntBASIC3.81□□□□□ -1.8
CLCN3P51790 RNU6-359P-201ENST00000365466 108 ntBASIC3.81□□□□□ -1.8
CLCN3P51790 AL583834.1-201ENST00000406943 343 ntBASIC3.81□□□□□ -1.8
CLCN3P51790 RNA5SP120-201ENST00000410900 112 ntBASIC3.81□□□□□ -1.8
CLCN3P51790 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.81□□□□□ -1.8
CLCN3P51790 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.81□□□□□ -1.8
CLCN3P51790 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.81□□□□□ -1.8
CLCN3P51790 MTCO3P30-201ENST00000426425 670 ntBASIC3.81□□□□□ -1.8
CLCN3P51790 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.81□□□□□ -1.8
CLCN3P51790 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.81□□□□□ -1.8
CLCN3P51790 TRIM60P18-201ENST00000441518 828 ntBASIC3.81□□□□□ -1.8
CLCN3P51790 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.81□□□□□ -1.8
CLCN3P51790 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.81□□□□□ -1.8
CLCN3P51790 AC078817.1-201ENST00000492623 435 ntBASIC3.81□□□□□ -1.8
CLCN3P51790 MTND4P2-201ENST00000507767 1203 ntBASIC3.81□□□□□ -1.8
CLCN3P51790 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLCN3P51790 AC006390.1-201ENST00000508068 283 ntBASIC3.81□□□□□ -1.8
CLCN3P51790 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.81□□□□□ -1.8
CLCN3P51790 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.81□□□□□ -1.8
CLCN3P51790 AC060788.1-201ENST00000521318 469 ntBASIC3.81□□□□□ -1.8
CLCN3P51790 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.81□□□□□ -1.8
CLCN3P51790 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.81□□□□□ -1.8
CLCN3P51790 AP002963.1-201ENST00000530590 184 ntBASIC3.81□□□□□ -1.8
CLCN3P51790 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.81□□□□□ -1.8
CLCN3P51790 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.81□□□□□ -1.8
CLCN3P51790 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.81□□□□□ -1.8
CLCN3P51790 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.81□□□□□ -1.8
CLCN3P51790 ROCK1P1-201ENST00000573767 549 ntBASIC3.81□□□□□ -1.8
CLCN3P51790 AC099489.2-201ENST00000574976 260 ntBASIC3.81□□□□□ -1.8
CLCN3P51790 MIR5195-201ENST00000583555 115 ntBASIC3.81□□□□□ -1.8
CLCN3P51790 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.81□□□□□ -1.8
CLCN3P51790 AC119751.7-201ENST00000600494 245 ntBASIC3.81□□□□□ -1.8
CLCN3P51790 AC103591.3-201ENST00000608684 209 ntBASIC3.81□□□□□ -1.8
CLCN3P51790 AC106028.5-201ENST00000610332 395 ntBASIC3.81□□□□□ -1.8
CLCN3P51790 AC104073.3-201ENST00000610942 955 ntBASIC3.81□□□□□ -1.8
CLCN3P51790 AC068792.1-201ENST00000621354 417 ntBASIC3.81□□□□□ -1.8
CLCN3P51790 AC009878.1-201ENST00000621819 340 ntBASIC3.81□□□□□ -1.8
CLCN3P51790 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.81□□□□□ -1.8
CLCN3P51790 AC090582.1-201ENST00000636321 199 ntBASIC3.81□□□□□ -1.8
CLCN3P51790 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.81□□□□□ -1.8
CLCN3P51790 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLCN3P51790 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.8□□□□□ -1.8
CLCN3P51790 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CLCN3P51790 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLCN3P51790 RNA5SP197-201ENST00000363357 119 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CLCN3P51790 RNU6-192P-201ENST00000391253 100 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 RNU4-78P-201ENST00000410940 126 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 TPMTP3-201ENST00000411928 735 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 AC127526.1-201ENST00000417526 366 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 AC092832.1-201ENST00000422934 400 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.8□□□□□ -1.8
CLCN3P51790 MTCO1P19-201ENST00000443487 500 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 RPL7P52-201ENST00000449200 742 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 AL353691.1-201ENST00000451332 387 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 RN7SL93P-201ENST00000463035 293 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 AP000873.1-201ENST00000463987 400 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 ST13P14-201ENST00000474095 734 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 AC023424.2-201ENST00000493479 777 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 DSTNP2-201ENST00000504533 515 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 AC021678.1-201ENST00000505195 936 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.8□□□□□ -1.8
CLCN3P51790 AC026427.2-201ENST00000506228 536 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 CBX3P3-201ENST00000508108 532 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.8□□□□□ -1.8
CLCN3P51790 Y_RNA.695-201ENST00000516715 107 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 AP006245.1-201ENST00000522549 120 ntBASIC3.8□□□□□ -1.8
CLCN3P51790 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.8□□□□□ -1.8
CLCN3P51790 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.8□□□□□ -1.8
CLCN3P51790 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.8□□□□□ -1.8
CLCN3P51790 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms