Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.62□□□□□ -1.99
CX3CR1P49238 RPL26P6-201ENST00000440913 438 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.62□□□□□ -1.99
CX3CR1P49238 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.62□□□□□ -1.99
CX3CR1P49238 FTH1P2-201ENST00000466086 412 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 RPL23AP11-201ENST00000475260 469 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 AC104982.1-201ENST00000478775 574 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 RPS29P2-201ENST00000479278 136 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 AC090453.1-201ENST00000495560 436 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 AC002456.2-201ENST00000509356 380 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.62□□□□□ -1.99
CX3CR1P49238 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.62□□□□□ -1.99
CX3CR1P49238 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.62□□□□□ -1.99
CX3CR1P49238 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CX3CR1P49238 NDUFS5P6-201ENST00000529136 295 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.62□□□□□ -1.99
CX3CR1P49238 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.62□□□□□ -1.99
CX3CR1P49238 HSPE1P3-201ENST00000559254 309 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.62□□□□□ -1.99
CX3CR1P49238 MIR3921-201ENST00000577308 85 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 MTCO3P13-201ENST00000577757 781 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 AL606834.3-201ENST00000602615 496 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 DUXAP4-201ENST00000603046 613 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 AC079089.3-201ENST00000603094 673 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 AL133507.1-201ENST00000605269 557 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.62□□□□□ -1.99
CX3CR1P49238 DUXAP10-204ENST00000612052 616 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 MIR6798-201ENST00000612887 67 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CX3CR1P49238 AC090617.7-201ENST00000623952 126 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 AC026422.1-201ENST00000623961 452 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.62□□□□□ -1.99
CX3CR1P49238 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.62□□□□□ -1.99
CX3CR1P49238 CRYM-AS1-204ENST00000637983 556 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CX3CR1P49238 AC107982.1-201ENST00000507171 1300 ntBASIC2.62□□□□□ -1.99
CX3CR1P49238 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.62□□□□□ -1.99
CX3CR1P49238 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.62□□□□□ -1.99
CX3CR1P49238 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CX3CR1P49238 AC012321.1-201ENST00000561622 1588 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.61□□□□□ -1.99
CX3CR1P49238 AP003122.5-201ENST00000527668 3766 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 AC097714.1-201ENST00000511272 1647 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CX3CR1P49238 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CX3CR1P49238 SNORA71.3-201ENST00000362582 128 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.61□□□□□ -1.99
CX3CR1P49238 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CX3CR1P49238 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CX3CR1P49238 RNVU1-14-201ENST00000384770 164 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CX3CR1P49238 AL031121.1-201ENST00000406553 254 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 RPS3AP25-201ENST00000411660 793 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 MTATP6P27-201ENST00000416987 621 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 AL356320.2-201ENST00000417263 507 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.61□□□□□ -1.99
CX3CR1P49238 HMGN2P30-201ENST00000423237 256 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 AC234781.2-201ENST00000426370 994 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.61□□□□□ -1.99
CX3CR1P49238 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.61□□□□□ -1.99
CX3CR1P49238 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.61□□□□□ -1.99
CX3CR1P49238 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.61□□□□□ -1.99
CX3CR1P49238 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.61□□□□□ -1.99
CX3CR1P49238 COX6CP2-201ENST00000444980 225 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 GSTA11P-201ENST00000452866 669 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 MTCO3P11-201ENST00000455103 774 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 TMEM251P1-201ENST00000503717 318 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 AC147055.4-201ENST00000504399 745 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.61□□□□□ -1.99
CX3CR1P49238 AC114322.1-201ENST00000506771 926 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 AC074250.1-201ENST00000511117 192 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 RNU6-798P-201ENST00000516912 103 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.61□□□□□ -1.99
CX3CR1P49238 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.61□□□□□ -1.99
CX3CR1P49238 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CX3CR1P49238 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.61□□□□□ -1.99
CX3CR1P49238 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.61□□□□□ -1.99
CX3CR1P49238 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.61□□□□□ -1.99
CX3CR1P49238 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.61□□□□□ -1.99
CX3CR1P49238 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.61□□□□□ -1.99
CX3CR1P49238 NBEAP1-201ENST00000554452 979 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.61□□□□□ -1.99
CX3CR1P49238 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.61□□□□□ -1.99
CX3CR1P49238 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.61□□□□□ -1.99
CX3CR1P49238 DNAJC19P3-201ENST00000594491 331 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.61□□□□□ -1.99
CX3CR1P49238 AC004853.1-201ENST00000604902 698 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 AC120349.2-201ENST00000625002 298 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 AC099654.8-201ENST00000637757 681 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 MIR1322-201ENST00000638013 71 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 AC087359.1-201ENST00000508335 1740 ntBASIC2.61□□□□□ -1.99
CX3CR1P49238 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CX3CR1P49238 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CX3CR1P49238 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CX3CR1P49238 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
CX3CR1P49238 FRG1BP-201ENST00000278882 761 ntBASIC2.6□□□□□ -1.99
CX3CR1P49238 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms