Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 MIR3137-201ENST00000577367 75 ntBASIC3.17□□□□□ -1.9
PCP4P48539 RN7SL744P-201ENST00000577604 267 ntBASIC3.17□□□□□ -1.9
PCP4P48539 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC3.17□□□□□ -1.9
PCP4P48539 AC117569.1-202ENST00000581532 557 ntTSL 5 BASIC3.17□□□□□ -1.9
PCP4P48539 MIR3941-201ENST00000582572 103 ntBASIC3.17□□□□□ -1.9
PCP4P48539 AC024267.2-201ENST00000582737 417 ntBASIC3.17□□□□□ -1.9
PCP4P48539 MIR3942-201ENST00000585264 109 ntBASIC3.17□□□□□ -1.9
PCP4P48539 SNRPCP20-201ENST00000588011 210 ntBASIC3.17□□□□□ -1.9
PCP4P48539 AL445223.1-201ENST00000595998 1051 ntBASIC3.17□□□□□ -1.9
PCP4P48539 ZNF98-205ENST00000601553 566 ntTSL 3 BASIC3.17□□□□□ -1.9
PCP4P48539 AC104662.1-201ENST00000604448 511 ntBASIC3.17□□□□□ -1.9
PCP4P48539 AC123912.5-201ENST00000605470 343 ntBASIC3.17□□□□□ -1.9
PCP4P48539 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC3.17□□□□□ -1.9
PCP4P48539 AL359921.2-201ENST00000608547 543 ntBASIC3.17□□□□□ -1.9
PCP4P48539 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCP4P48539 Mico1.1-201ENST00000611698 204 ntBASIC3.17□□□□□ -1.9
PCP4P48539 AL592227.1-201ENST00000614748 126 ntBASIC3.17□□□□□ -1.9
PCP4P48539 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.17□□□□□ -1.9
PCP4P48539 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC3.17□□□□□ -1.9
PCP4P48539 LYG2-206ENST00000626374 650 ntTSL 5 BASIC3.17□□□□□ -1.9
PCP4P48539 AC135068.10-201ENST00000638015 913 ntBASIC3.17□□□□□ -1.9
PCP4P48539 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
PCP4P48539 MAPK10-373ENST00000641983 6772 ntBASIC3.17□□□□□ -1.9
PCP4P48539 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PCP4P48539 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PCP4P48539 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
PCP4P48539 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCP4P48539 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
PCP4P48539 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PCP4P48539 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCP4P48539 MAPK10-322ENST00000641485 4530 ntBASIC3.16□□□□□ -1.9
PCP4P48539 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCP4P48539 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
PCP4P48539 AL138847.1-201ENST00000258651 546 ntBASIC3.16□□□□□ -1.9
PCP4P48539 OR10R3P-201ENST00000361688 942 ntBASIC3.16□□□□□ -1.9
PCP4P48539 RNU6-254P-201ENST00000363377 107 ntBASIC3.16□□□□□ -1.9
PCP4P48539 RNA5SP433-201ENST00000364491 114 ntBASIC3.16□□□□□ -1.9
PCP4P48539 RNA5SP355-201ENST00000365317 135 ntBASIC3.16□□□□□ -1.9
PCP4P48539 Y_RNA.414-201ENST00000384011 101 ntBASIC3.16□□□□□ -1.9
PCP4P48539 MIR602-201ENST00000384960 98 ntBASIC3.16□□□□□ -1.9
PCP4P48539 IGKV2D-26-201ENST00000390268 390 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PCP4P48539 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PCP4P48539 RNA5SP474-201ENST00000391234 90 ntBASIC3.16□□□□□ -1.9
PCP4P48539 RAN-201ENST00000392367 780 ntTSL 5 BASIC3.16□□□□□ -1.9
PCP4P48539 OR4K12P-201ENST00000406538 961 ntBASIC3.16□□□□□ -1.9
PCP4P48539 AC023141.4-201ENST00000412031 328 ntBASIC3.16□□□□□ -1.9
PCP4P48539 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCP4P48539 FAM83C-AS1-201ENST00000429167 352 ntTSL 3 BASIC3.16□□□□□ -1.9
PCP4P48539 HMGB1P9-201ENST00000429856 646 ntBASIC3.16□□□□□ -1.9
PCP4P48539 IFNA20P-201ENST00000436840 528 ntBASIC3.16□□□□□ -1.9
PCP4P48539 USP9YP8-201ENST00000441913 500 ntBASIC3.16□□□□□ -1.9
PCP4P48539 ATP5G2P4-201ENST00000442175 420 ntBASIC3.16□□□□□ -1.9
PCP4P48539 AC019185.1-201ENST00000442718 389 ntBASIC3.16□□□□□ -1.9
PCP4P48539 RPS29P5-201ENST00000452777 171 ntBASIC3.16□□□□□ -1.9
PCP4P48539 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC3.16□□□□□ -1.9
PCP4P48539 RN7SL62P-201ENST00000498506 297 ntBASIC3.16□□□□□ -1.9
PCP4P48539 AC091951.2-201ENST00000500762 203 ntBASIC3.16□□□□□ -1.9
PCP4P48539 RPS4XP20-201ENST00000505751 772 ntBASIC3.16□□□□□ -1.9
PCP4P48539 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.16□□□□□ -1.9
PCP4P48539 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.16□□□□□ -1.9
PCP4P48539 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.16□□□□□ -1.9
PCP4P48539 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.16□□□□□ -1.9
PCP4P48539 AC091951.4-201ENST00000512746 332 ntTSL 5 BASIC3.16□□□□□ -1.9
PCP4P48539 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.16□□□□□ -1.9
PCP4P48539 AC105206.2-201ENST00000523556 515 ntTSL 2 BASIC3.16□□□□□ -1.9
PCP4P48539 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.16□□□□□ -1.9
PCP4P48539 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCP4P48539 AP001858.2-201ENST00000536213 601 ntBASIC3.16□□□□□ -1.9
PCP4P48539 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.16□□□□□ -1.9
PCP4P48539 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.16□□□□□ -1.9
PCP4P48539 BICD1-206ENST00000551086 423 ntTSL 3 BASIC3.16□□□□□ -1.9
PCP4P48539 SCOCP1-201ENST00000554676 349 ntBASIC3.16□□□□□ -1.9
PCP4P48539 LINC00933-203ENST00000559812 219 ntBASIC3.16□□□□□ -1.9
PCP4P48539 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.16□□□□□ -1.9
PCP4P48539 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC3.16□□□□□ -1.9
PCP4P48539 AC090772.2-201ENST00000578443 564 ntTSL 4 BASIC3.16□□□□□ -1.9
PCP4P48539 RN7SL237P-201ENST00000580912 287 ntBASIC3.16□□□□□ -1.9
PCP4P48539 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC3.16□□□□□ -1.9
PCP4P48539 AL451007.1-201ENST00000595491 289 ntBASIC3.16□□□□□ -1.9
PCP4P48539 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.16□□□□□ -1.9
PCP4P48539 AC006557.5-201ENST00000603126 811 ntBASIC3.16□□□□□ -1.9
PCP4P48539 APOOP1-201ENST00000604695 592 ntBASIC3.16□□□□□ -1.9
PCP4P48539 AL357078.3-201ENST00000607528 618 ntBASIC3.16□□□□□ -1.9
PCP4P48539 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC3.16□□□□□ -1.9
PCP4P48539 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCP4P48539 AL161629.2-201ENST00000615347 275 ntBASIC3.16□□□□□ -1.9
PCP4P48539 AC022306.2-201ENST00000617563 647 ntBASIC3.16□□□□□ -1.9
PCP4P48539 AC243654.1-201ENST00000620218 293 ntTSL 2 BASIC3.16□□□□□ -1.9
PCP4P48539 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.16□□□□□ -1.9
PCP4P48539 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.16□□□□□ -1.9
PCP4P48539 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCP4P48539 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.16□□□□□ -1.9
PCP4P48539 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
PCP4P48539 AC010680.1-201ENST00000590024 3590 ntBASIC3.16□□□□□ -1.9
PCP4P48539 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
PCP4P48539 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.15□□□□□ -1.9
PCP4P48539 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.15□□□□□ -1.9
PCP4P48539 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PCP4P48539 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.15□□□□□ -1.9
PCP4P48539 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 156.8 ms