Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SNORA70.14-201ENST00000516205 110 ntBASIC1.78□□□□□ -2.12
HTTP42858 AC011712.1-201ENST00000588959 234 ntBASIC1.78□□□□□ -2.12
HTTP42858 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.12
HTTP42858 COX6CP12-201ENST00000446748 202 ntBASIC1.77□□□□□ -2.13
HTTP42858 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.77□□□□□ -2.13
HTTP42858 Y_RNA.681-201ENST00000516445 113 ntBASIC1.77□□□□□ -2.13
HTTP42858 AC008568.2-201ENST00000623862 2313 ntBASIC1.77□□□□□ -2.13
HTTP42858 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HTTP42858 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HTTP42858 SRIP3-201ENST00000413200 219 ntBASIC1.77□□□□□ -2.13
HTTP42858 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.77□□□□□ -2.13
HTTP42858 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.77□□□□□ -2.13
HTTP42858 MIR3074-201ENST00000384885 81 ntBASIC1.77□□□□□ -2.13
HTTP42858 AL353093.1-201ENST00000441292 436 ntBASIC1.77□□□□□ -2.13
HTTP42858 EXTL2P1-201ENST00000446218 416 ntBASIC1.77□□□□□ -2.13
HTTP42858 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.77□□□□□ -2.13
HTTP42858 RNU2-58P-201ENST00000516403 183 ntBASIC1.77□□□□□ -2.13
HTTP42858 RNA5SP402-201ENST00000517148 110 ntBASIC1.77□□□□□ -2.13
HTTP42858 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.77□□□□□ -2.13
HTTP42858 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC1.77□□□□□ -2.13
HTTP42858 AC099654.11-201ENST00000638857 294 ntBASIC1.77□□□□□ -2.13
HTTP42858 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
HTTP42858 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HTTP42858 XKRYP4-201ENST00000414395 483 ntBASIC1.76□□□□□ -2.13
HTTP42858 HMGB1P45-201ENST00000435986 653 ntBASIC1.76□□□□□ -2.13
HTTP42858 XKRYP5-201ENST00000449659 483 ntBASIC1.76□□□□□ -2.13
HTTP42858 HMGN1P28-201ENST00000521340 364 ntBASIC1.76□□□□□ -2.13
HTTP42858 RFPL1S-203ENST00000539579 330 ntBASIC1.76□□□□□ -2.13
HTTP42858 7SK.7-201ENST00000603504 247 ntBASIC1.76□□□□□ -2.13
HTTP42858 AL157834.3-201ENST00000615543 103 ntBASIC1.76□□□□□ -2.13
HTTP42858 MTCO1P14-201ENST00000441695 1559 ntBASIC1.76□□□□□ -2.13
HTTP42858 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.76□□□□□ -2.13
HTTP42858 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.76□□□□□ -2.13
HTTP42858 AL391646.1-201ENST00000603860 190 ntBASIC1.76□□□□□ -2.13
HTTP42858 MIR502-201ENST00000606349 86 ntBASIC1.76□□□□□ -2.13
HTTP42858 U73479.1-201ENST00000618062 168 ntBASIC1.76□□□□□ -2.13
HTTP42858 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
HTTP42858 SNORA16.1-201ENST00000364597 132 ntBASIC1.75□□□□□ -2.13
HTTP42858 AL354695.1-201ENST00000427935 228 ntBASIC1.75□□□□□ -2.13
HTTP42858 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.75□□□□□ -2.13
HTTP42858 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HTTP42858 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
HTTP42858 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC1.75□□□□□ -2.13
HTTP42858 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
HTTP42858 AF274854.1-201ENST00000413236 615 ntBASIC1.75□□□□□ -2.13
HTTP42858 NEK4P1-201ENST00000433383 879 ntBASIC1.75□□□□□ -2.13
HTTP42858 MTND1P18-201ENST00000448191 573 ntBASIC1.75□□□□□ -2.13
HTTP42858 AC009474.2-201ENST00000451383 136 ntBASIC1.75□□□□□ -2.13
HTTP42858 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.75□□□□□ -2.13
HTTP42858 AC013444.2-201ENST00000603317 787 ntBASIC1.75□□□□□ -2.13
HTTP42858 AP000553.5-201ENST00000641933 54 ntBASIC1.75□□□□□ -2.13
HTTP42858 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.75□□□□□ -2.13
HTTP42858 RPL23AP29-201ENST00000397284 453 ntBASIC1.75□□□□□ -2.13
HTTP42858 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.75□□□□□ -2.13
HTTP42858 TBCAP3-201ENST00000512475 312 ntBASIC1.75□□□□□ -2.13
HTTP42858 SNORD48-201ENST00000364953 64 ntBASIC1.74□□□□□ -2.13
HTTP42858 RN7SKP101-201ENST00000411376 320 ntBASIC1.74□□□□□ -2.13
HTTP42858 RNU6-516P-201ENST00000411381 104 ntBASIC1.74□□□□□ -2.13
HTTP42858 RPL21P2-201ENST00000440049 481 ntBASIC1.74□□□□□ -2.13
HTTP42858 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.74□□□□□ -2.13
HTTP42858 AIG1P1-201ENST00000503376 148 ntBASIC1.74□□□□□ -2.13
HTTP42858 USP9YP5-201ENST00000511770 630 ntBASIC1.74□□□□□ -2.13
HTTP42858 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.74□□□□□ -2.13
HTTP42858 AC006023.2-201ENST00000609916 167 ntBASIC1.74□□□□□ -2.13
HTTP42858 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC1.74□□□□□ -2.13
HTTP42858 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC1.74□□□□□ -2.13
HTTP42858 SNORA31-201ENST00000362607 130 ntBASIC1.74□□□□□ -2.13
HTTP42858 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.74□□□□□ -2.13
HTTP42858 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.74□□□□□ -2.13
HTTP42858 SUMO2P6-201ENST00000505273 288 ntBASIC1.74□□□□□ -2.13
HTTP42858 AF131216.2-201ENST00000512316 564 ntBASIC1.74□□□□□ -2.13
HTTP42858 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.74□□□□□ -2.13
HTTP42858 AC093010.3-201ENST00000570269 15214 ntBASIC1.74□□□□□ -2.13
HTTP42858 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.74□□□□□ -2.13
HTTP42858 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC1.74□□□□□ -2.13
HTTP42858 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
HTTP42858 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HTTP42858 MTCO3P31-201ENST00000405526 789 ntBASIC1.73□□□□□ -2.13
HTTP42858 AC093084.1-201ENST00000424233 687 ntBASIC1.73□□□□□ -2.13
HTTP42858 AC090453.1-201ENST00000495560 436 ntBASIC1.73□□□□□ -2.13
HTTP42858 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HTTP42858 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.73□□□□□ -2.13
HTTP42858 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.73□□□□□ -2.13
HTTP42858 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HTTP42858 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.73□□□□□ -2.13
HTTP42858 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.73□□□□□ -2.13
HTTP42858 KATNBL1P1-201ENST00000605192 748 ntBASIC1.73□□□□□ -2.13
HTTP42858 AC091895.1-201ENST00000624494 256 ntBASIC1.73□□□□□ -2.13
HTTP42858 AC002546.1-201ENST00000588041 2504 ntBASIC1.73□□□□□ -2.13
HTTP42858 MIR517C-201ENST00000385103 95 ntBASIC1.73□□□□□ -2.13
HTTP42858 AC002524.1-201ENST00000411687 547 ntBASIC1.73□□□□□ -2.13
HTTP42858 MTCO3P44-201ENST00000510977 541 ntBASIC1.73□□□□□ -2.13
HTTP42858 GLYCAM1-201ENST00000546596 285 ntBASIC1.73□□□□□ -2.13
HTTP42858 AL137100.2-201ENST00000555786 315 ntBASIC1.73□□□□□ -2.13
HTTP42858 AC024614.2-201ENST00000577584 372 ntBASIC1.73□□□□□ -2.13
HTTP42858 AC007687.1-201ENST00000602704 304 ntBASIC1.73□□□□□ -2.13
HTTP42858 MIR98-201ENST00000606724 119 ntBASIC1.73□□□□□ -2.13
HTTP42858 AC107294.3-201ENST00000609211 526 ntBASIC1.73□□□□□ -2.13
HTTP42858 CDC27P3-201ENST00000635418 1910 ntBASIC1.72□□□□□ -2.13
HTTP42858 OR4G11P-202ENST00000642116 1414 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms