Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 VN1R82P-201ENST00000601481 356 ntBASIC3.12□□□□□ -1.91
HMGCLP35914 AC103881.1-201ENST00000603476 538 ntBASIC3.12□□□□□ -1.91
HMGCLP35914 AC012468.1-201ENST00000604888 430 ntBASIC3.12□□□□□ -1.91
HMGCLP35914 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.12□□□□□ -1.91
HMGCLP35914 AL513477.2-201ENST00000607858 568 ntBASIC3.12□□□□□ -1.91
HMGCLP35914 TUSC7.1-201ENST00000610969 165 ntBASIC3.12□□□□□ -1.91
HMGCLP35914 AC087683.2-201ENST00000611384 326 ntBASIC3.12□□□□□ -1.91
HMGCLP35914 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HMGCLP35914 AC099506.2-201ENST00000623074 221 ntBASIC3.12□□□□□ -1.91
HMGCLP35914 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HMGCLP35914 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
HMGCLP35914 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HMGCLP35914 GDI2P1-201ENST00000429312 1336 ntBASIC3.12□□□□□ -1.91
HMGCLP35914 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HMGCLP35914 DDX43P2-201ENST00000604753 1354 ntBASIC3.12□□□□□ -1.91
HMGCLP35914 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
HMGCLP35914 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HMGCLP35914 AL079343.1-201ENST00000572358 1771 ntBASIC3.11□□□□□ -1.91
HMGCLP35914 RNU5A-2P-201ENST00000384337 116 ntBASIC3.11□□□□□ -1.91
HMGCLP35914 AC016769.3-201ENST00000396562 315 ntBASIC3.11□□□□□ -1.91
HMGCLP35914 RPL23AP29-201ENST00000397284 453 ntBASIC3.11□□□□□ -1.91
HMGCLP35914 AL138880.1-201ENST00000405824 642 ntBASIC3.11□□□□□ -1.91
HMGCLP35914 AC007899.1-201ENST00000412776 775 ntBASIC3.11□□□□□ -1.91
HMGCLP35914 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGCLP35914 TRIM60P18-201ENST00000441518 828 ntBASIC3.11□□□□□ -1.91
HMGCLP35914 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.11□□□□□ -1.91
HMGCLP35914 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGCLP35914 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGCLP35914 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.11□□□□□ -1.91
HMGCLP35914 AC093392.2-201ENST00000450682 337 ntBASIC3.11□□□□□ -1.91
HMGCLP35914 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.11□□□□□ -1.91
HMGCLP35914 MTCO3P11-201ENST00000455103 774 ntBASIC3.11□□□□□ -1.91
HMGCLP35914 AC026410.2-201ENST00000460281 156 ntBASIC3.11□□□□□ -1.91
HMGCLP35914 RPS3AP43-201ENST00000479743 781 ntBASIC3.11□□□□□ -1.91
HMGCLP35914 AC114981.1-201ENST00000503897 678 ntBASIC3.11□□□□□ -1.91
HMGCLP35914 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HMGCLP35914 RNY4P37-201ENST00000516225 96 ntBASIC3.11□□□□□ -1.91
HMGCLP35914 AC026407.1-201ENST00000518369 204 ntBASIC3.11□□□□□ -1.91
HMGCLP35914 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.11□□□□□ -1.91
HMGCLP35914 DEFB131D-201ENST00000526803 184 ntBASIC3.11□□□□□ -1.91
HMGCLP35914 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.11□□□□□ -1.91
HMGCLP35914 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGCLP35914 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGCLP35914 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGCLP35914 PRELID3BP8-201ENST00000604148 295 ntBASIC3.11□□□□□ -1.91
HMGCLP35914 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.11□□□□□ -1.91
HMGCLP35914 AL390240.1-201ENST00000612950 384 ntBASIC3.11□□□□□ -1.91
HMGCLP35914 AC090116.1-201ENST00000615679 446 ntBASIC3.11□□□□□ -1.91
HMGCLP35914 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HMGCLP35914 U6.101-201ENST00000637707 76 ntBASIC3.11□□□□□ -1.91
HMGCLP35914 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HMGCLP35914 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
HMGCLP35914 OR5BR1P-201ENST00000524992 1330 ntBASIC3.11□□□□□ -1.91
HMGCLP35914 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.11□□□□□ -1.91
HMGCLP35914 AC005539.1-201ENST00000443768 1479 ntBASIC3.1□□□□□ -1.91
HMGCLP35914 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
HMGCLP35914 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HMGCLP35914 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HMGCLP35914 U3.29-201ENST00000391296 212 ntBASIC3.1□□□□□ -1.91
HMGCLP35914 AC110754.1-201ENST00000399740 601 ntBASIC3.1□□□□□ -1.91
HMGCLP35914 RPL7P25-201ENST00000404151 721 ntBASIC3.1□□□□□ -1.91
HMGCLP35914 PIGPP2-201ENST00000411569 458 ntBASIC3.1□□□□□ -1.91
HMGCLP35914 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.1□□□□□ -1.91
HMGCLP35914 AC005005.2-201ENST00000420779 380 ntBASIC3.1□□□□□ -1.91
HMGCLP35914 RPL7P34-201ENST00000433316 712 ntBASIC3.1□□□□□ -1.91
HMGCLP35914 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HMGCLP35914 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HMGCLP35914 AL008629.1-201ENST00000438615 184 ntBASIC3.1□□□□□ -1.91
HMGCLP35914 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGCLP35914 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.1□□□□□ -1.91
HMGCLP35914 MTND2P19-201ENST00000449129 1012 ntBASIC3.1□□□□□ -1.91
HMGCLP35914 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.1□□□□□ -1.91
HMGCLP35914 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.1□□□□□ -1.91
HMGCLP35914 AC092757.1-201ENST00000467293 467 ntBASIC3.1□□□□□ -1.91
HMGCLP35914 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.1□□□□□ -1.91
HMGCLP35914 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.1□□□□□ -1.91
HMGCLP35914 RNA5SP385-201ENST00000515947 110 ntBASIC3.1□□□□□ -1.91
HMGCLP35914 RNU6-1129P-201ENST00000515964 104 ntBASIC3.1□□□□□ -1.91
HMGCLP35914 OR5AK1P-201ENST00000524837 922 ntBASIC3.1□□□□□ -1.91
HMGCLP35914 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGCLP35914 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.1□□□□□ -1.91
HMGCLP35914 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.1□□□□□ -1.91
HMGCLP35914 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.1□□□□□ -1.91
HMGCLP35914 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGCLP35914 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGCLP35914 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.1□□□□□ -1.91
HMGCLP35914 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.1□□□□□ -1.91
HMGCLP35914 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.1□□□□□ -1.91
HMGCLP35914 DPRXP5-201ENST00000604662 539 ntBASIC3.1□□□□□ -1.91
HMGCLP35914 AC124312.4-201ENST00000605533 310 ntBASIC3.1□□□□□ -1.91
HMGCLP35914 AL139418.1-201ENST00000613613 177 ntBASIC3.1□□□□□ -1.91
HMGCLP35914 AC026422.1-201ENST00000623961 452 ntBASIC3.1□□□□□ -1.91
HMGCLP35914 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGCLP35914 CYP3A51P-201ENST00000633513 256 ntBASIC3.1□□□□□ -1.91
HMGCLP35914 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HMGCLP35914 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HMGCLP35914 NUP58P1-201ENST00000502546 1738 ntBASIC3.1□□□□□ -1.91
HMGCLP35914 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.1□□□□□ -1.91
HMGCLP35914 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.1□□□□□ -1.91
HMGCLP35914 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms