Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.67□□□□□ -1.98
SCN4AP35499 RNU6-452P-201ENST00000384406 107 ntBASIC2.67□□□□□ -1.98
SCN4AP35499 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.67□□□□□ -1.98
SCN4AP35499 ATG3P1-201ENST00000419507 911 ntBASIC2.67□□□□□ -1.98
SCN4AP35499 AL513175.2-201ENST00000422071 443 ntBASIC2.67□□□□□ -1.98
SCN4AP35499 VN1R42P-201ENST00000424651 344 ntBASIC2.67□□□□□ -1.98
SCN4AP35499 DPPA2P1-201ENST00000428060 556 ntBASIC2.67□□□□□ -1.98
SCN4AP35499 OR51B8P-201ENST00000449892 769 ntBASIC2.67□□□□□ -1.98
SCN4AP35499 PTGES3P5-201ENST00000455109 434 ntBASIC2.67□□□□□ -1.98
SCN4AP35499 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.67□□□□□ -1.98
SCN4AP35499 AL049829.1-201ENST00000465411 156 ntBASIC2.67□□□□□ -1.98
SCN4AP35499 SNRPGP3-201ENST00000469405 227 ntBASIC2.67□□□□□ -1.98
SCN4AP35499 AC103975.1-201ENST00000482506 483 ntBASIC2.67□□□□□ -1.98
SCN4AP35499 AC005912.1-201ENST00000495392 255 ntBASIC2.67□□□□□ -1.98
SCN4AP35499 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.67□□□□□ -1.98
SCN4AP35499 AC124293.1-201ENST00000530034 493 ntBASIC2.67□□□□□ -1.98
SCN4AP35499 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.67□□□□□ -1.98
SCN4AP35499 AC092451.2-201ENST00000538746 658 ntBASIC2.67□□□□□ -1.98
SCN4AP35499 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SCN4AP35499 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
SCN4AP35499 AC010198.2-201ENST00000550612 259 ntBASIC2.67□□□□□ -1.98
SCN4AP35499 AL356266.1-201ENST00000623311 483 ntBASIC2.67□□□□□ -1.98
SCN4AP35499 AC020923.1-201ENST00000624021 917 ntBASIC2.67□□□□□ -1.98
SCN4AP35499 AL590396.2-201ENST00000636511 1041 ntBASIC2.67□□□□□ -1.98
SCN4AP35499 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.67□□□□□ -1.98
SCN4AP35499 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
SCN4AP35499 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SCN4AP35499 RNU6-481P-201ENST00000384194 107 ntBASIC2.66□□□□□ -1.98
SCN4AP35499 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SCN4AP35499 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.66□□□□□ -1.98
SCN4AP35499 SNORA11.4-201ENST00000408823 129 ntBASIC2.66□□□□□ -1.98
SCN4AP35499 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.66□□□□□ -1.98
SCN4AP35499 AC026412.2-201ENST00000512270 1075 ntBASIC2.66□□□□□ -1.98
SCN4AP35499 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.66□□□□□ -1.98
SCN4AP35499 RNU6-1053P-201ENST00000515930 101 ntBASIC2.66□□□□□ -1.98
SCN4AP35499 AC025881.1-201ENST00000518851 512 ntBASIC2.66□□□□□ -1.98
SCN4AP35499 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.66□□□□□ -1.98
SCN4AP35499 AC092474.3-201ENST00000603022 568 ntBASIC2.66□□□□□ -1.98
SCN4AP35499 RMST_10.1-201ENST00000616309 154 ntBASIC2.66□□□□□ -1.98
SCN4AP35499 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SCN4AP35499 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
SCN4AP35499 Y_RNA.110-201ENST00000363220 99 ntBASIC2.65□□□□□ -1.98
SCN4AP35499 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
SCN4AP35499 RNU6-796P-201ENST00000391086 107 ntBASIC2.65□□□□□ -1.98
SCN4AP35499 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.65□□□□□ -1.98
SCN4AP35499 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.65□□□□□ -1.98
SCN4AP35499 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.65□□□□□ -1.98
SCN4AP35499 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.65□□□□□ -1.98
SCN4AP35499 RNA5SP200-201ENST00000516360 103 ntBASIC2.65□□□□□ -1.98
SCN4AP35499 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.65□□□□□ -1.98
SCN4AP35499 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.65□□□□□ -1.98
SCN4AP35499 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.65□□□□□ -1.98
SCN4AP35499 DUXAP3-201ENST00000603616 594 ntBASIC2.65□□□□□ -1.98
SCN4AP35499 AP003072.4-201ENST00000624580 310 ntBASIC2.65□□□□□ -1.98
SCN4AP35499 AP005901.5-201ENST00000545779 1796 ntBASIC2.65□□□□□ -1.98
SCN4AP35499 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
SCN4AP35499 MTCO1P18-201ENST00000455518 1419 ntBASIC2.65□□□□□ -1.99
SCN4AP35499 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
SCN4AP35499 MFSD8-213ENST00000641134 1327 ntBASIC2.65□□□□□ -1.99
SCN4AP35499 Y_RNA.466-201ENST00000384294 113 ntBASIC2.65□□□□□ -1.99
SCN4AP35499 MIR124-3-201ENST00000384866 87 ntBASIC2.65□□□□□ -1.99
SCN4AP35499 HMGB1P10-201ENST00000395823 563 ntBASIC2.65□□□□□ -1.99
SCN4AP35499 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.65□□□□□ -1.99
SCN4AP35499 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.65□□□□□ -1.99
SCN4AP35499 AC004866.2-201ENST00000438285 481 ntBASIC2.65□□□□□ -1.99
SCN4AP35499 RPL7P54-201ENST00000438336 674 ntBASIC2.65□□□□□ -1.99
SCN4AP35499 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.65□□□□□ -1.99
SCN4AP35499 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.65□□□□□ -1.99
SCN4AP35499 RPL7P31-201ENST00000450192 724 ntBASIC2.65□□□□□ -1.99
SCN4AP35499 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.65□□□□□ -1.99
SCN4AP35499 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.65□□□□□ -1.99
SCN4AP35499 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.65□□□□□ -1.99
SCN4AP35499 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.65□□□□□ -1.99
SCN4AP35499 OR4K7P-201ENST00000580232 945 ntBASIC2.65□□□□□ -1.99
SCN4AP35499 AP003117.1-201ENST00000602771 554 ntBASIC2.65□□□□□ -1.99
SCN4AP35499 AC069304.3-201ENST00000603938 1084 ntBASIC2.65□□□□□ -1.99
SCN4AP35499 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.65□□□□□ -1.99
SCN4AP35499 AC009570.1-201ENST00000609599 745 ntBASIC2.65□□□□□ -1.99
SCN4AP35499 AC093673.2-201ENST00000609674 331 ntBASIC2.65□□□□□ -1.99
SCN4AP35499 AC096586.1-201ENST00000610267 561 ntBASIC2.65□□□□□ -1.99
SCN4AP35499 AL137847.3-201ENST00000611521 109 ntBASIC2.65□□□□□ -1.99
SCN4AP35499 STMN1P1-201ENST00000617809 440 ntBASIC2.65□□□□□ -1.99
SCN4AP35499 AL356094.1-201ENST00000624663 1212 ntBASIC2.65□□□□□ -1.99
SCN4AP35499 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
SCN4AP35499 MIR16-2-201ENST00000362117 81 ntBASIC2.64□□□□□ -1.99
SCN4AP35499 MIR525-201ENST00000384978 85 ntBASIC2.64□□□□□ -1.99
SCN4AP35499 UBE2V1P9-201ENST00000414760 368 ntBASIC2.64□□□□□ -1.99
SCN4AP35499 BX664727.1-201ENST00000416024 466 ntBASIC2.64□□□□□ -1.99
SCN4AP35499 YWHAZP8-201ENST00000436935 731 ntBASIC2.64□□□□□ -1.99
SCN4AP35499 RPL23AP33-201ENST00000442301 452 ntBASIC2.64□□□□□ -1.99
SCN4AP35499 RNFT1P2-201ENST00000443064 757 ntBASIC2.64□□□□□ -1.99
SCN4AP35499 AC097499.1-201ENST00000444277 208 ntBASIC2.64□□□□□ -1.99
SCN4AP35499 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.64□□□□□ -1.99
SCN4AP35499 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.64□□□□□ -1.99
SCN4AP35499 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.64□□□□□ -1.99
SCN4AP35499 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.64□□□□□ -1.99
SCN4AP35499 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SCN4AP35499 OR4R2P-201ENST00000530815 597 ntBASIC2.64□□□□□ -1.99
SCN4AP35499 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.64□□□□□ -1.99
SCN4AP35499 AL161713.1-201ENST00000555538 145 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms