Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 PDSS1P1-201ENST00000422953 1114 ntBASIC4.32□□□□□ -1.72
SLC6A4P31645 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC6A4P31645 AL359073.1-201ENST00000448036 403 ntBASIC4.32□□□□□ -1.72
SLC6A4P31645 AC140076.1-201ENST00000449897 361 ntBASIC4.32□□□□□ -1.72
SLC6A4P31645 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC6A4P31645 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC6A4P31645 RNA5SP246-201ENST00000458909 119 ntBASIC4.32□□□□□ -1.72
SLC6A4P31645 RNU6-261P-201ENST00000459506 102 ntBASIC4.32□□□□□ -1.72
SLC6A4P31645 AC079804.1-201ENST00000461922 436 ntBASIC4.32□□□□□ -1.72
SLC6A4P31645 RN7SL604P-201ENST00000492589 296 ntBASIC4.32□□□□□ -1.72
SLC6A4P31645 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC6A4P31645 AC114781.4-201ENST00000513707 639 ntBASIC4.32□□□□□ -1.72
SLC6A4P31645 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.32□□□□□ -1.72
SLC6A4P31645 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SLC6A4P31645 AC100770.1-201ENST00000532310 322 ntBASIC4.32□□□□□ -1.72
SLC6A4P31645 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.32□□□□□ -1.72
SLC6A4P31645 PDCD5P1-201ENST00000543528 309 ntBASIC4.32□□□□□ -1.72
SLC6A4P31645 ADI1P3-201ENST00000549509 470 ntBASIC4.32□□□□□ -1.72
SLC6A4P31645 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.32□□□□□ -1.72
SLC6A4P31645 AL161713.1-201ENST00000555538 145 ntBASIC4.32□□□□□ -1.72
SLC6A4P31645 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC6A4P31645 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.32□□□□□ -1.72
SLC6A4P31645 AC005730.3-201ENST00000583067 366 ntBASIC4.32□□□□□ -1.72
SLC6A4P31645 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.32□□□□□ -1.72
SLC6A4P31645 MIR6867-201ENST00000610636 67 ntBASIC4.32□□□□□ -1.72
SLC6A4P31645 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SLC6A4P31645 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SLC6A4P31645 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SLC6A4P31645 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SLC6A4P31645 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.31□□□□□ -1.72
SLC6A4P31645 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SLC6A4P31645 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SLC6A4P31645 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SLC6A4P31645 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SLC6A4P31645 CBX3P1-201ENST00000325243 554 ntBASIC4.31□□□□□ -1.72
SLC6A4P31645 RNA5SP130-201ENST00000364431 114 ntBASIC4.31□□□□□ -1.72
SLC6A4P31645 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
SLC6A4P31645 SNORA37-201ENST00000384504 129 ntBASIC4.31□□□□□ -1.72
SLC6A4P31645 RNU6-278P-201ENST00000390945 109 ntBASIC4.31□□□□□ -1.72
SLC6A4P31645 JKAMPP1-201ENST00000413804 919 ntBASIC4.31□□□□□ -1.72
SLC6A4P31645 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.31□□□□□ -1.72
SLC6A4P31645 AC092832.1-201ENST00000422934 400 ntBASIC4.31□□□□□ -1.72
SLC6A4P31645 RBMY1KP-201ENST00000423480 476 ntBASIC4.31□□□□□ -1.72
SLC6A4P31645 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.31□□□□□ -1.72
SLC6A4P31645 RAC1P7-201ENST00000445367 377 ntBASIC4.31□□□□□ -1.72
SLC6A4P31645 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.31□□□□□ -1.72
SLC6A4P31645 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.31□□□□□ -1.72
SLC6A4P31645 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.31□□□□□ -1.72
SLC6A4P31645 AC098799.2-201ENST00000509466 868 ntBASIC4.31□□□□□ -1.72
SLC6A4P31645 AC046134.1-201ENST00000514454 666 ntBASIC4.31□□□□□ -1.72
SLC6A4P31645 HIGD1AP3-201ENST00000515857 278 ntBASIC4.31□□□□□ -1.72
SLC6A4P31645 RN7SKP116-201ENST00000516902 319 ntBASIC4.31□□□□□ -1.72
SLC6A4P31645 IGKV2D-36-201ENST00000518643 226 ntBASIC4.31□□□□□ -1.72
SLC6A4P31645 AC090572.1-201ENST00000519251 160 ntBASIC4.31□□□□□ -1.72
SLC6A4P31645 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.31□□□□□ -1.72
SLC6A4P31645 IGLV3-26-201ENST00000520756 302 ntBASIC4.31□□□□□ -1.72
SLC6A4P31645 AF235103.2-201ENST00000525753 346 ntBASIC4.31□□□□□ -1.72
SLC6A4P31645 OR4R1P-201ENST00000529879 463 ntBASIC4.31□□□□□ -1.72
SLC6A4P31645 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.31□□□□□ -1.72
SLC6A4P31645 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.31□□□□□ -1.72
SLC6A4P31645 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.31□□□□□ -1.72
SLC6A4P31645 AC090616.5-202ENST00000582111 297 ntBASIC4.31□□□□□ -1.72
SLC6A4P31645 MIR4719-201ENST00000585233 84 ntBASIC4.31□□□□□ -1.72
SLC6A4P31645 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.31□□□□□ -1.72
SLC6A4P31645 MIR7151-201ENST00000617477 60 ntBASIC4.31□□□□□ -1.72
SLC6A4P31645 AC104985.2-201ENST00000620598 500 ntBASIC4.31□□□□□ -1.72
SLC6A4P31645 AC008785.1-201ENST00000624475 456 ntBASIC4.31□□□□□ -1.72
SLC6A4P31645 MIR3662-201ENST00000637030 95 ntBASIC4.31□□□□□ -1.72
SLC6A4P31645 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SLC6A4P31645 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.31□□□□□ -1.72
SLC6A4P31645 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SLC6A4P31645 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SLC6A4P31645 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SLC6A4P31645 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.31□□□□□ -1.72
SLC6A4P31645 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
SLC6A4P31645 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
SLC6A4P31645 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SLC6A4P31645 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SLC6A4P31645 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.3□□□□□ -1.72
SLC6A4P31645 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
SLC6A4P31645 CKAP2P1-201ENST00000555477 2049 ntBASIC4.3□□□□□ -1.72
SLC6A4P31645 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SLC6A4P31645 RNU1-15P-201ENST00000353977 144 ntBASIC4.3□□□□□ -1.72
SLC6A4P31645 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SLC6A4P31645 MIR372-201ENST00000362225 67 ntBASIC4.3□□□□□ -1.72
SLC6A4P31645 SNORA70E-201ENST00000384492 135 ntBASIC4.3□□□□□ -1.72
SLC6A4P31645 MIR19A-201ENST00000384878 82 ntBASIC4.3□□□□□ -1.72
SLC6A4P31645 RNU11-4P-201ENST00000391149 133 ntBASIC4.3□□□□□ -1.72
SLC6A4P31645 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SLC6A4P31645 MIR1179-201ENST00000408703 91 ntBASIC4.3□□□□□ -1.72
SLC6A4P31645 RNU2-41P-201ENST00000410991 178 ntBASIC4.3□□□□□ -1.72
SLC6A4P31645 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC6A4P31645 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.3□□□□□ -1.72
SLC6A4P31645 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC6A4P31645 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC6A4P31645 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SLC6A4P31645 FTH1P1-201ENST00000437933 532 ntBASIC4.3□□□□□ -1.72
SLC6A4P31645 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC6A4P31645 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC6A4P31645 RNU6-420P-201ENST00000458780 107 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms