Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA13P31271 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HOXA13P31271 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA13P31271 AC011477.1-204ENST00000623416 1325 ntBASIC3.79□□□□□ -1.8
HOXA13P31271 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HOXA13P31271 AL161781.1-201ENST00000354277 403 ntBASIC3.79□□□□□ -1.8
HOXA13P31271 RNU1-70P-201ENST00000362618 164 ntBASIC3.79□□□□□ -1.8
HOXA13P31271 RNU6-1074P-201ENST00000383995 104 ntBASIC3.79□□□□□ -1.8
HOXA13P31271 Y_RNA.560-201ENST00000384689 102 ntBASIC3.79□□□□□ -1.8
HOXA13P31271 AL356421.1-201ENST00000403255 413 ntBASIC3.79□□□□□ -1.8
HOXA13P31271 AC126124.2-201ENST00000413542 321 ntBASIC3.79□□□□□ -1.8
HOXA13P31271 HMGB1P11-201ENST00000413899 637 ntBASIC3.79□□□□□ -1.8
HOXA13P31271 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXA13P31271 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXA13P31271 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXA13P31271 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXA13P31271 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HOXA13P31271 AC008264.1-201ENST00000447612 367 ntBASIC3.79□□□□□ -1.8
HOXA13P31271 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXA13P31271 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXA13P31271 BZW1P2-201ENST00000473537 826 ntBASIC3.79□□□□□ -1.8
HOXA13P31271 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXA13P31271 RPL23AP55-201ENST00000498163 452 ntBASIC3.79□□□□□ -1.8
HOXA13P31271 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXA13P31271 AC005921.1-201ENST00000510589 286 ntBASIC3.79□□□□□ -1.8
HOXA13P31271 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.79□□□□□ -1.8
HOXA13P31271 AC034159.1-201ENST00000513885 583 ntBASIC3.79□□□□□ -1.8
HOXA13P31271 AC093677.1-201ENST00000514414 678 ntBASIC3.79□□□□□ -1.8
HOXA13P31271 SNORA74D-201ENST00000516404 141 ntBASIC3.79□□□□□ -1.8
HOXA13P31271 RNU6-232P-201ENST00000517144 64 ntBASIC3.79□□□□□ -1.8
HOXA13P31271 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.79□□□□□ -1.8
HOXA13P31271 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXA13P31271 AC109635.4-202ENST00000531666 412 ntBASIC3.79□□□□□ -1.8
HOXA13P31271 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA13P31271 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXA13P31271 CR383656.7-201ENST00000548164 174 ntBASIC3.79□□□□□ -1.8
HOXA13P31271 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXA13P31271 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.79□□□□□ -1.8
HOXA13P31271 AC007954.1-201ENST00000554198 494 ntBASIC3.79□□□□□ -1.8
HOXA13P31271 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.79□□□□□ -1.8
HOXA13P31271 MIR5680-201ENST00000577577 84 ntBASIC3.79□□□□□ -1.8
HOXA13P31271 AC090616.2-202ENST00000584248 222 ntBASIC3.79□□□□□ -1.8
HOXA13P31271 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXA13P31271 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA13P31271 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA13P31271 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA13P31271 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXA13P31271 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA13P31271 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXA13P31271 MTND4P16-201ENST00000466108 1367 ntBASIC3.78□□□□□ -1.8
HOXA13P31271 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXA13P31271 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXA13P31271 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
HOXA13P31271 RNU6-97P-201ENST00000363387 104 ntBASIC3.78□□□□□ -1.8
HOXA13P31271 SNORA38.1-201ENST00000364172 131 ntBASIC3.78□□□□□ -1.8
HOXA13P31271 SNORA7.2-201ENST00000364446 145 ntBASIC3.78□□□□□ -1.8
HOXA13P31271 RNU6-343P-201ENST00000364709 104 ntBASIC3.78□□□□□ -1.8
HOXA13P31271 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.78□□□□□ -1.8
HOXA13P31271 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXA13P31271 AL137014.1-201ENST00000420490 1226 ntBASIC3.78□□□□□ -1.8
HOXA13P31271 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA13P31271 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.78□□□□□ -1.8
HOXA13P31271 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA13P31271 RPL21P66-201ENST00000426566 466 ntBASIC3.78□□□□□ -1.8
HOXA13P31271 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA13P31271 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXA13P31271 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXA13P31271 AL138799.3-201ENST00000438968 350 ntBASIC3.78□□□□□ -1.8
HOXA13P31271 MTND2P4-201ENST00000445034 1004 ntBASIC3.78□□□□□ -1.8
HOXA13P31271 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA13P31271 RPS4XP2-201ENST00000458402 793 ntBASIC3.78□□□□□ -1.8
HOXA13P31271 MTND3P7-201ENST00000474435 343 ntBASIC3.78□□□□□ -1.8
HOXA13P31271 HMGB1P36-201ENST00000487709 576 ntBASIC3.78□□□□□ -1.8
HOXA13P31271 AP001025.2-201ENST00000490908 477 ntBASIC3.78□□□□□ -1.8
HOXA13P31271 RPF2P2-201ENST00000504693 896 ntBASIC3.78□□□□□ -1.8
HOXA13P31271 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA13P31271 PHBP14-201ENST00000512887 367 ntBASIC3.78□□□□□ -1.8
HOXA13P31271 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXA13P31271 MTCO1P47-201ENST00000523889 1271 ntBASIC3.78□□□□□ -1.8
HOXA13P31271 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA13P31271 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA13P31271 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA13P31271 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA13P31271 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA13P31271 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.78□□□□□ -1.8
HOXA13P31271 AC121247.2-201ENST00000604776 136 ntBASIC3.78□□□□□ -1.8
HOXA13P31271 AL590099.1-201ENST00000615276 138 ntBASIC3.78□□□□□ -1.8
HOXA13P31271 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA13P31271 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.78□□□□□ -1.8
HOXA13P31271 AL356321.1-201ENST00000621360 228 ntBASIC3.78□□□□□ -1.8
HOXA13P31271 AC018816.2-201ENST00000621460 353 ntBASIC3.78□□□□□ -1.8
HOXA13P31271 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HOXA13P31271 AP001350.1-201ENST00000601906 1524 ntBASIC3.78□□□□□ -1.8
HOXA13P31271 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HOXA13P31271 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXA13P31271 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXA13P31271 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXA13P31271 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HOXA13P31271 RNU6-660P-201ENST00000364566 109 ntBASIC3.77□□□□□ -1.81
HOXA13P31271 RNU6-744P-201ENST00000365557 107 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms