Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 Y_RNA.40-201ENST00000362645 93 ntBASIC2.71□□□□□ -1.98
CLIP1P30622 RNY1P10-201ENST00000363268 113 ntBASIC2.71□□□□□ -1.98
CLIP1P30622 Y_RNA.269-201ENST00000364685 89 ntBASIC2.71□□□□□ -1.98
CLIP1P30622 AP1B1P2-201ENST00000416196 106 ntBASIC2.71□□□□□ -1.98
CLIP1P30622 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.71□□□□□ -1.98
CLIP1P30622 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.71□□□□□ -1.98
CLIP1P30622 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.71□□□□□ -1.98
CLIP1P30622 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CLIP1P30622 AC104581.2-201ENST00000572227 430 ntBASIC2.71□□□□□ -1.98
CLIP1P30622 MIR502-201ENST00000606349 86 ntBASIC2.71□□□□□ -1.98
CLIP1P30622 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.71□□□□□ -1.98
CLIP1P30622 UBE2L2-201ENST00000254302 429 ntBASIC2.7□□□□□ -1.98
CLIP1P30622 TOMM22P1-201ENST00000418578 312 ntBASIC2.7□□□□□ -1.98
CLIP1P30622 AC009414.1-201ENST00000427200 443 ntBASIC2.7□□□□□ -1.98
CLIP1P30622 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.7□□□□□ -1.98
CLIP1P30622 RPS29P12-201ENST00000460178 152 ntBASIC2.7□□□□□ -1.98
CLIP1P30622 AL163540.1-201ENST00000485382 386 ntBASIC2.7□□□□□ -1.98
CLIP1P30622 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.7□□□□□ -1.98
CLIP1P30622 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.7□□□□□ -1.98
CLIP1P30622 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.7□□□□□ -1.98
CLIP1P30622 MIR4446-201ENST00000578505 67 ntBASIC2.7□□□□□ -1.98
CLIP1P30622 VN1R84P-201ENST00000593697 235 ntBASIC2.7□□□□□ -1.98
CLIP1P30622 FO624990.1-201ENST00000636373 85 ntBASIC2.7□□□□□ -1.98
CLIP1P30622 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLIP1P30622 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CLIP1P30622 Z98749.2-208ENST00000381646 500 ntBASIC2.69□□□□□ -1.98
CLIP1P30622 RNU1-101P-201ENST00000391171 127 ntBASIC2.69□□□□□ -1.98
CLIP1P30622 RPL5P19-201ENST00000404228 893 ntBASIC2.69□□□□□ -1.98
CLIP1P30622 AL450338.1-201ENST00000407987 512 ntBASIC2.69□□□□□ -1.98
CLIP1P30622 HMGN2P20-201ENST00000437531 273 ntBASIC2.69□□□□□ -1.98
CLIP1P30622 TPT1P14-201ENST00000448018 505 ntBASIC2.69□□□□□ -1.98
CLIP1P30622 SNORD108-201ENST00000459332 71 ntBASIC2.69□□□□□ -1.98
CLIP1P30622 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.69□□□□□ -1.98
CLIP1P30622 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.69□□□□□ -1.98
CLIP1P30622 AC091057.2-201ENST00000602594 792 ntBASIC2.69□□□□□ -1.98
CLIP1P30622 AL035411.2-201ENST00000604022 421 ntBASIC2.69□□□□□ -1.98
CLIP1P30622 AC018754.1-201ENST00000607486 925 ntBASIC2.69□□□□□ -1.98
CLIP1P30622 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.69□□□□□ -1.98
CLIP1P30622 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CLIP1P30622 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CLIP1P30622 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CLIP1P30622 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.68□□□□□ -1.98
CLIP1P30622 RPS3AP4-201ENST00000555161 764 ntBASIC2.68□□□□□ -1.98
CLIP1P30622 AC090425.2-201ENST00000608818 501 ntBASIC2.68□□□□□ -1.98
CLIP1P30622 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
CLIP1P30622 MIR8070-201ENST00000616510 88 ntBASIC2.68□□□□□ -1.98
CLIP1P30622 AC012150.2-201ENST00000621300 544 ntBASIC2.68□□□□□ -1.98
CLIP1P30622 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CLIP1P30622 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.68□□□□□ -1.98
CLIP1P30622 RNU1-109P-201ENST00000383960 147 ntBASIC2.68□□□□□ -1.98
CLIP1P30622 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CLIP1P30622 MTCYBP45-201ENST00000435243 565 ntBASIC2.68□□□□□ -1.98
CLIP1P30622 USP9YP10-201ENST00000454868 628 ntBASIC2.68□□□□□ -1.98
CLIP1P30622 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CLIP1P30622 AC108078.2-201ENST00000510750 236 ntBASIC2.68□□□□□ -1.98
CLIP1P30622 HMGB1P47-201ENST00000511281 589 ntBASIC2.68□□□□□ -1.98
CLIP1P30622 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.68□□□□□ -1.98
CLIP1P30622 AC117532.1-201ENST00000514638 323 ntBASIC2.68□□□□□ -1.98
CLIP1P30622 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.68□□□□□ -1.98
CLIP1P30622 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.68□□□□□ -1.98
CLIP1P30622 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.68□□□□□ -1.98
CLIP1P30622 MIR4474-201ENST00000579189 78 ntBASIC2.68□□□□□ -1.98
CLIP1P30622 AC124283.4-201ENST00000581815 456 ntBASIC2.68□□□□□ -1.98
CLIP1P30622 AC013444.2-201ENST00000603317 787 ntBASIC2.68□□□□□ -1.98
CLIP1P30622 AC024560.3-201ENST00000608482 349 ntBASIC2.68□□□□□ -1.98
CLIP1P30622 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.67□□□□□ -1.98
CLIP1P30622 RNA5SP27-201ENST00000363839 119 ntBASIC2.67□□□□□ -1.98
CLIP1P30622 Y_RNA.796-201ENST00000364268 102 ntBASIC2.67□□□□□ -1.98
CLIP1P30622 Y_RNA.799-201ENST00000364992 102 ntBASIC2.67□□□□□ -1.98
CLIP1P30622 XKRYP4-201ENST00000414395 483 ntBASIC2.67□□□□□ -1.98
CLIP1P30622 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.67□□□□□ -1.98
CLIP1P30622 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.67□□□□□ -1.98
CLIP1P30622 HMGB1P27-201ENST00000431429 603 ntBASIC2.67□□□□□ -1.98
CLIP1P30622 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.67□□□□□ -1.98
CLIP1P30622 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.67□□□□□ -1.98
CLIP1P30622 XKRYP5-201ENST00000449659 483 ntBASIC2.67□□□□□ -1.98
CLIP1P30622 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.67□□□□□ -1.98
CLIP1P30622 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.67□□□□□ -1.98
CLIP1P30622 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.67□□□□□ -1.98
CLIP1P30622 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.67□□□□□ -1.98
CLIP1P30622 AC010546.1-201ENST00000569391 485 ntBASIC2.67□□□□□ -1.98
CLIP1P30622 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.67□□□□□ -1.98
CLIP1P30622 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.66□□□□□ -1.98
CLIP1P30622 MIR337-201ENST00000362281 93 ntBASIC2.66□□□□□ -1.98
CLIP1P30622 AL121972.1-201ENST00000402023 252 ntBASIC2.66□□□□□ -1.98
CLIP1P30622 HMGB3P10-201ENST00000434734 572 ntBASIC2.66□□□□□ -1.98
CLIP1P30622 ELOCP10-201ENST00000440624 327 ntBASIC2.66□□□□□ -1.98
CLIP1P30622 SSXP1-201ENST00000453640 473 ntBASIC2.66□□□□□ -1.98
CLIP1P30622 AC023424.2-201ENST00000493479 777 ntBASIC2.66□□□□□ -1.98
CLIP1P30622 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.66□□□□□ -1.98
CLIP1P30622 AC109471.1-201ENST00000511631 612 ntBASIC2.66□□□□□ -1.98
CLIP1P30622 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.66□□□□□ -1.98
CLIP1P30622 SUB1P3-201ENST00000564581 315 ntBASIC2.66□□□□□ -1.98
CLIP1P30622 ELOCP34-201ENST00000604436 327 ntBASIC2.66□□□□□ -1.98
CLIP1P30622 HPVC1-201ENST00000629899 1198 ntBASIC2.66□□□□□ -1.98
CLIP1P30622 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CLIP1P30622 AL359715.4-201ENST00000606629 1436 ntBASIC2.65□□□□□ -1.99
CLIP1P30622 AC048351.1-201ENST00000420064 602 ntBASIC2.65□□□□□ -1.99
CLIP1P30622 HSPE1P1-201ENST00000421494 318 ntBASIC2.65□□□□□ -1.99
CLIP1P30622 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms