Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AP000432.2-201ENST00000624164 2048 ntBASIC5.84□□□□□ -1.48
RFX1P22670 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.84□□□□□ -1.48
RFX1P22670 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RFX1P22670 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RFX1P22670 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
RFX1P22670 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
RFX1P22670 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RFX1P22670 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
RFX1P22670 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
RFX1P22670 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
RFX1P22670 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
RFX1P22670 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RFX1P22670 SDAD1P2-201ENST00000441308 2028 ntBASIC5.83□□□□□ -1.48
RFX1P22670 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RFX1P22670 OR5P1P-201ENST00000299512 925 ntBASIC5.83□□□□□ -1.48
RFX1P22670 AC092809.3-201ENST00000415453 231 ntBASIC5.83□□□□□ -1.48
RFX1P22670 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.83□□□□□ -1.48
RFX1P22670 AL160275.3-201ENST00000423876 471 ntBASIC5.83□□□□□ -1.48
RFX1P22670 MRPS21P2-201ENST00000424704 264 ntBASIC5.83□□□□□ -1.48
RFX1P22670 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.83□□□□□ -1.48
RFX1P22670 RPS11P7-201ENST00000442125 465 ntBASIC5.83□□□□□ -1.48
RFX1P22670 AC090602.1-201ENST00000469695 252 ntBASIC5.83□□□□□ -1.48
RFX1P22670 AC092754.1-201ENST00000472975 479 ntBASIC5.83□□□□□ -1.48
RFX1P22670 AC022133.1-201ENST00000490961 571 ntBASIC5.83□□□□□ -1.48
RFX1P22670 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.83□□□□□ -1.48
RFX1P22670 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.83□□□□□ -1.48
RFX1P22670 SCARNA16.4-201ENST00000516956 187 ntBASIC5.83□□□□□ -1.48
RFX1P22670 ERHP1-201ENST00000523006 310 ntBASIC5.83□□□□□ -1.48
RFX1P22670 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.83□□□□□ -1.48
RFX1P22670 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.83□□□□□ -1.48
RFX1P22670 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.83□□□□□ -1.48
RFX1P22670 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RFX1P22670 AP000769.2-201ENST00000602344 396 ntBASIC5.83□□□□□ -1.48
RFX1P22670 AL031320.1-201ENST00000604177 357 ntBASIC5.83□□□□□ -1.48
RFX1P22670 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.83□□□□□ -1.48
RFX1P22670 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.83□□□□□ -1.48
RFX1P22670 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
RFX1P22670 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFX1P22670 AL078621.3-201ENST00000623707 2042 ntBASIC5.82□□□□□ -1.48
RFX1P22670 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RFX1P22670 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.82□□□□□ -1.48
RFX1P22670 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFX1P22670 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFX1P22670 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.82□□□□□ -1.48
RFX1P22670 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFX1P22670 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.82□□□□□ -1.48
RFX1P22670 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFX1P22670 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.82□□□□□ -1.48
RFX1P22670 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFX1P22670 SNORD3E-201ENST00000362899 217 ntBASIC5.82□□□□□ -1.48
RFX1P22670 RN7SKP153-201ENST00000365026 316 ntBASIC5.82□□□□□ -1.48
RFX1P22670 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFX1P22670 SNORA36C-201ENST00000384289 132 ntBASIC5.82□□□□□ -1.48
RFX1P22670 RNU6-310P-201ENST00000384655 107 ntBASIC5.82□□□□□ -1.48
RFX1P22670 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.82□□□□□ -1.48
RFX1P22670 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.82□□□□□ -1.48
RFX1P22670 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.82□□□□□ -1.48
RFX1P22670 RPL7P28-201ENST00000437739 740 ntBASIC5.82□□□□□ -1.48
RFX1P22670 TXNP1-201ENST00000441872 371 ntBASIC5.82□□□□□ -1.48
RFX1P22670 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.82□□□□□ -1.48
RFX1P22670 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.82□□□□□ -1.48
RFX1P22670 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RFX1P22670 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.82□□□□□ -1.48
RFX1P22670 AC021146.2-201ENST00000504736 556 ntBASIC5.82□□□□□ -1.48
RFX1P22670 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
RFX1P22670 RNU6-976P-201ENST00000516086 111 ntBASIC5.82□□□□□ -1.48
RFX1P22670 RNU6-1046P-201ENST00000516538 107 ntBASIC5.82□□□□□ -1.48
RFX1P22670 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.82□□□□□ -1.48
RFX1P22670 AC008489.1-201ENST00000524271 483 ntBASIC5.82□□□□□ -1.48
RFX1P22670 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.82□□□□□ -1.48
RFX1P22670 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.82□□□□□ -1.48
RFX1P22670 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.82□□□□□ -1.48
RFX1P22670 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.82□□□□□ -1.48
RFX1P22670 HMGB3P26-201ENST00000560051 582 ntBASIC5.82□□□□□ -1.48
RFX1P22670 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
RFX1P22670 PRPF19P1-201ENST00000584766 898 ntBASIC5.82□□□□□ -1.48
RFX1P22670 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.82□□□□□ -1.48
RFX1P22670 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.82□□□□□ -1.48
RFX1P22670 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RFX1P22670 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RFX1P22670 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RFX1P22670 AC010300.1-201ENST00000600671 5134 ntBASIC5.82□□□□□ -1.48
RFX1P22670 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RFX1P22670 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RFX1P22670 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RFX1P22670 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFX1P22670 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RFX1P22670 DDX18P3-201ENST00000404856 2007 ntBASIC5.81□□□□□ -1.48
RFX1P22670 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.81□□□□□ -1.48
RFX1P22670 AC023421.1-201ENST00000590535 1785 ntBASIC5.81□□□□□ -1.48
RFX1P22670 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
RFX1P22670 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RFX1P22670 AC093671.1-201ENST00000624981 2929 ntBASIC5.81□□□□□ -1.48
RFX1P22670 OR1L6-202ENST00000373684 1044 ntBASIC5.81□□□□□ -1.48
RFX1P22670 AC117470.1-201ENST00000381974 330 ntBASIC5.81□□□□□ -1.48
RFX1P22670 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RFX1P22670 AL139039.1-201ENST00000401900 692 ntBASIC5.81□□□□□ -1.48
RFX1P22670 AL121834.1-202ENST00000404494 277 ntBASIC5.81□□□□□ -1.48
RFX1P22670 AC016397.1-201ENST00000412463 242 ntBASIC5.81□□□□□ -1.48
RFX1P22670 AL591212.2-201ENST00000433923 257 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms