Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.23□□□□□ -2.05
COL11A1P12107 CENPUP2-201ENST00000555897 1186 ntBASIC2.23□□□□□ -2.05
COL11A1P12107 AC034268.2-201ENST00000571784 482 ntBASIC2.23□□□□□ -2.05
COL11A1P12107 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.23□□□□□ -2.05
COL11A1P12107 AC023043.2-201ENST00000589678 1026 ntBASIC2.23□□□□□ -2.05
COL11A1P12107 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.23□□□□□ -2.05
COL11A1P12107 AC073387.2-201ENST00000604797 784 ntBASIC2.23□□□□□ -2.05
COL11A1P12107 snoU13.31-201ENST00000607291 104 ntBASIC2.23□□□□□ -2.05
COL11A1P12107 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.23□□□□□ -2.05
COL11A1P12107 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.23□□□□□ -2.05
COL11A1P12107 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.23□□□□□ -2.05
COL11A1P12107 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
COL11A1P12107 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL11A1P12107 METTL21EP-201ENST00000298105 713 ntBASIC2.22□□□□□ -2.05
COL11A1P12107 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
COL11A1P12107 DNAJC19P6-201ENST00000401853 280 ntBASIC2.22□□□□□ -2.05
COL11A1P12107 RNU6-1140P-201ENST00000410517 106 ntBASIC2.22□□□□□ -2.05
COL11A1P12107 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.22□□□□□ -2.05
COL11A1P12107 FAM204CP-201ENST00000424489 642 ntBASIC2.22□□□□□ -2.05
COL11A1P12107 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.22□□□□□ -2.05
COL11A1P12107 ZFAND6P1-201ENST00000434138 605 ntBASIC2.22□□□□□ -2.05
COL11A1P12107 AL392003.1-201ENST00000434394 243 ntBASIC2.22□□□□□ -2.05
COL11A1P12107 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.22□□□□□ -2.05
COL11A1P12107 RPL31P20-201ENST00000449593 360 ntBASIC2.22□□□□□ -2.05
COL11A1P12107 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.22□□□□□ -2.05
COL11A1P12107 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.22□□□□□ -2.05
COL11A1P12107 C1DP3-201ENST00000455013 423 ntBASIC2.22□□□□□ -2.05
COL11A1P12107 RPL7P5-201ENST00000471472 736 ntBASIC2.22□□□□□ -2.05
COL11A1P12107 AP000852.1-201ENST00000472460 573 ntBASIC2.22□□□□□ -2.05
COL11A1P12107 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL11A1P12107 AC012181.1-201ENST00000479895 423 ntBASIC2.22□□□□□ -2.05
COL11A1P12107 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
COL11A1P12107 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
COL11A1P12107 AC098799.2-201ENST00000509466 868 ntBASIC2.22□□□□□ -2.05
COL11A1P12107 TMEM248P1-201ENST00000510579 951 ntBASIC2.22□□□□□ -2.05
COL11A1P12107 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.22□□□□□ -2.05
COL11A1P12107 RNU6-889P-201ENST00000517189 103 ntBASIC2.22□□□□□ -2.05
COL11A1P12107 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
COL11A1P12107 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.22□□□□□ -2.05
COL11A1P12107 SNRPGP1-201ENST00000553864 222 ntBASIC2.22□□□□□ -2.05
COL11A1P12107 AC009268.1-201ENST00000561352 1203 ntBASIC2.22□□□□□ -2.05
COL11A1P12107 LLPHP1-201ENST00000603571 367 ntBASIC2.22□□□□□ -2.05
COL11A1P12107 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL11A1P12107 OR5T3-201ENST00000303059 1023 ntBASIC2.21□□□□□ -2.05
COL11A1P12107 RNU6-666P-201ENST00000363499 107 ntBASIC2.21□□□□□ -2.05
COL11A1P12107 RNU6-670P-201ENST00000364312 104 ntBASIC2.21□□□□□ -2.05
COL11A1P12107 RNU6-891P-201ENST00000384280 111 ntBASIC2.21□□□□□ -2.05
COL11A1P12107 SNORA26.9-201ENST00000391322 122 ntBASIC2.21□□□□□ -2.05
COL11A1P12107 RPL7P54-201ENST00000438336 674 ntBASIC2.21□□□□□ -2.05
COL11A1P12107 RPL34P26-201ENST00000445636 354 ntBASIC2.21□□□□□ -2.05
COL11A1P12107 HMGN2P21-201ENST00000447764 270 ntBASIC2.21□□□□□ -2.05
COL11A1P12107 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.21□□□□□ -2.05
COL11A1P12107 AC021146.7-201ENST00000509604 775 ntBASIC2.21□□□□□ -2.05
COL11A1P12107 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.21□□□□□ -2.05
COL11A1P12107 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.21□□□□□ -2.05
COL11A1P12107 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.21□□□□□ -2.05
COL11A1P12107 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.21□□□□□ -2.05
COL11A1P12107 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.21□□□□□ -2.05
COL11A1P12107 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.21□□□□□ -2.05
COL11A1P12107 SNRPGP15-201ENST00000600149 222 ntBASIC2.21□□□□□ -2.05
COL11A1P12107 AC131902.3-201ENST00000611767 581 ntBASIC2.21□□□□□ -2.05
COL11A1P12107 AC034102.8-201ENST00000615146 484 ntBASIC2.21□□□□□ -2.05
COL11A1P12107 AC006065.5-201ENST00000623427 349 ntBASIC2.21□□□□□ -2.05
COL11A1P12107 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
COL11A1P12107 ZNF720P1-201ENST00000562403 1939 ntBASIC2.21□□□□□ -2.06
COL11A1P12107 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
COL11A1P12107 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
COL11A1P12107 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.21□□□□□ -2.06
COL11A1P12107 FAM35CP-201ENST00000554755 2470 ntBASIC2.21□□□□□ -2.06
COL11A1P12107 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
COL11A1P12107 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.21□□□□□ -2.06
COL11A1P12107 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.21□□□□□ -2.06
COL11A1P12107 CYCSP49-201ENST00000420810 319 ntBASIC2.21□□□□□ -2.06
COL11A1P12107 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.21□□□□□ -2.06
COL11A1P12107 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.21□□□□□ -2.06
COL11A1P12107 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.21□□□□□ -2.06
COL11A1P12107 AL157827.1-201ENST00000447622 132 ntBASIC2.21□□□□□ -2.06
COL11A1P12107 PTGES3P5-201ENST00000455109 434 ntBASIC2.21□□□□□ -2.06
COL11A1P12107 AC104629.2-201ENST00000468627 598 ntBASIC2.21□□□□□ -2.06
COL11A1P12107 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.21□□□□□ -2.06
COL11A1P12107 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.21□□□□□ -2.06
COL11A1P12107 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.21□□□□□ -2.06
COL11A1P12107 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.21□□□□□ -2.06
COL11A1P12107 AC002984.1-201ENST00000591692 448 ntBASIC2.21□□□□□ -2.06
COL11A1P12107 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.21□□□□□ -2.06
COL11A1P12107 MTCO2P22-201ENST00000603246 681 ntBASIC2.21□□□□□ -2.06
COL11A1P12107 AC011890.2-201ENST00000613393 294 ntBASIC2.21□□□□□ -2.06
COL11A1P12107 Y_RNA.783-201ENST00000613546 102 ntBASIC2.21□□□□□ -2.06
COL11A1P12107 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.21□□□□□ -2.06
COL11A1P12107 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
COL11A1P12107 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL11A1P12107 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.2□□□□□ -2.06
COL11A1P12107 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL11A1P12107 U3.37-201ENST00000408528 213 ntBASIC2.2□□□□□ -2.06
COL11A1P12107 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.2□□□□□ -2.06
COL11A1P12107 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.2□□□□□ -2.06
COL11A1P12107 FNDC3CP-201ENST00000420795 1155 ntBASIC2.2□□□□□ -2.06
COL11A1P12107 NEK4P1-201ENST00000433383 879 ntBASIC2.2□□□□□ -2.06
COL11A1P12107 AC023347.2-201ENST00000433994 462 ntBASIC2.2□□□□□ -2.06
COL11A1P12107 SDR42E1P3-201ENST00000438345 502 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms