Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.79□□□□□ -1.96
TPM1P09493 RPL30P5-201ENST00000494923 336 ntBASIC2.79□□□□□ -1.96
TPM1P09493 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.79□□□□□ -1.96
TPM1P09493 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.79□□□□□ -1.96
TPM1P09493 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.79□□□□□ -1.96
TPM1P09493 AC087241.2-201ENST00000535801 324 ntBASIC2.79□□□□□ -1.96
TPM1P09493 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.79□□□□□ -1.96
TPM1P09493 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.79□□□□□ -1.96
TPM1P09493 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TPM1P09493 ACTR3BP3-201ENST00000565577 979 ntBASIC2.79□□□□□ -1.96
TPM1P09493 AC009163.5-201ENST00000575421 637 ntBASIC2.79□□□□□ -1.96
TPM1P09493 AC079597.1-201ENST00000624306 508 ntBASIC2.79□□□□□ -1.96
TPM1P09493 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TPM1P09493 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.78□□□□□ -1.96
TPM1P09493 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.78□□□□□ -1.96
TPM1P09493 GDI2P1-201ENST00000429312 1336 ntBASIC2.78□□□□□ -1.96
TPM1P09493 RNU1-105P-201ENST00000363470 161 ntBASIC2.78□□□□□ -1.96
TPM1P09493 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TPM1P09493 SNORA51.6-201ENST00000384151 125 ntBASIC2.78□□□□□ -1.96
TPM1P09493 SNORA9-201ENST00000384215 133 ntBASIC2.78□□□□□ -1.96
TPM1P09493 MIR9-1-201ENST00000385198 89 ntBASIC2.78□□□□□ -1.96
TPM1P09493 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.78□□□□□ -1.96
TPM1P09493 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.78□□□□□ -1.96
TPM1P09493 ARPC3P1-201ENST00000437218 533 ntBASIC2.78□□□□□ -1.96
TPM1P09493 AC009296.1-201ENST00000443146 155 ntBASIC2.78□□□□□ -1.96
TPM1P09493 NDUFA5P7-201ENST00000452914 242 ntBASIC2.78□□□□□ -1.96
TPM1P09493 snoU13.28-201ENST00000459235 104 ntBASIC2.78□□□□□ -1.96
TPM1P09493 RPL31P60-201ENST00000478450 367 ntBASIC2.78□□□□□ -1.96
TPM1P09493 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TPM1P09493 RNA5SP282-201ENST00000516355 108 ntBASIC2.78□□□□□ -1.96
TPM1P09493 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.78□□□□□ -1.96
TPM1P09493 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.78□□□□□ -1.96
TPM1P09493 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.78□□□□□ -1.96
TPM1P09493 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.78□□□□□ -1.96
TPM1P09493 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.78□□□□□ -1.96
TPM1P09493 MYL12BP1-201ENST00000569826 507 ntBASIC2.78□□□□□ -1.96
TPM1P09493 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.78□□□□□ -1.96
TPM1P09493 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.78□□□□□ -1.96
TPM1P09493 AL159169.3-201ENST00000608871 561 ntBASIC2.78□□□□□ -1.96
TPM1P09493 MIR6075-201ENST00000620782 95 ntBASIC2.78□□□□□ -1.96
TPM1P09493 AL356585.4-201ENST00000623078 1229 ntBASIC2.78□□□□□ -1.96
TPM1P09493 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
TPM1P09493 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TPM1P09493 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.78□□□□□ -1.96
TPM1P09493 AC093536.2-201ENST00000565257 1406 ntBASIC2.77□□□□□ -1.97
TPM1P09493 AC009812.4-201ENST00000569134 1805 ntBASIC2.77□□□□□ -1.97
TPM1P09493 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
TPM1P09493 DEFB108F-201ENST00000344638 222 ntBASIC2.77□□□□□ -1.97
TPM1P09493 SNORD62.1-201ENST00000362541 86 ntBASIC2.77□□□□□ -1.97
TPM1P09493 SNORD56.4-201ENST00000363883 71 ntBASIC2.77□□□□□ -1.97
TPM1P09493 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.77□□□□□ -1.97
TPM1P09493 TAS2R15P-201ENST00000390674 928 ntBASIC2.77□□□□□ -1.97
TPM1P09493 AL356057.1-202ENST00000402263 756 ntBASIC2.77□□□□□ -1.97
TPM1P09493 AL355615.1-201ENST00000406187 641 ntBASIC2.77□□□□□ -1.97
TPM1P09493 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.77□□□□□ -1.97
TPM1P09493 AL592148.1-201ENST00000413568 445 ntBASIC2.77□□□□□ -1.97
TPM1P09493 MTCO2P17-201ENST00000424336 677 ntBASIC2.77□□□□□ -1.97
TPM1P09493 RPS15AP7-201ENST00000439294 405 ntBASIC2.77□□□□□ -1.97
TPM1P09493 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.77□□□□□ -1.97
TPM1P09493 RPS24P13-201ENST00000442520 397 ntBASIC2.77□□□□□ -1.97
TPM1P09493 RAC1P7-201ENST00000445367 377 ntBASIC2.77□□□□□ -1.97
TPM1P09493 RPL31P41-201ENST00000477967 372 ntBASIC2.77□□□□□ -1.97
TPM1P09493 RPS15AP34-201ENST00000487776 387 ntBASIC2.77□□□□□ -1.97
TPM1P09493 NAMPTP2-201ENST00000505629 1115 ntBASIC2.77□□□□□ -1.97
TPM1P09493 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TPM1P09493 AL359273.1-201ENST00000510918 627 ntBASIC2.77□□□□□ -1.97
TPM1P09493 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.77□□□□□ -1.97
TPM1P09493 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.77□□□□□ -1.97
TPM1P09493 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.77□□□□□ -1.97
TPM1P09493 OR5AK1P-201ENST00000524837 922 ntBASIC2.77□□□□□ -1.97
TPM1P09493 DEFB108D-201ENST00000527787 222 ntBASIC2.77□□□□□ -1.97
TPM1P09493 PRELID2P1-201ENST00000552837 301 ntBASIC2.77□□□□□ -1.97
TPM1P09493 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.77□□□□□ -1.97
TPM1P09493 AC090888.1-201ENST00000561335 1141 ntBASIC2.77□□□□□ -1.97
TPM1P09493 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.77□□□□□ -1.97
TPM1P09493 MIR3921-201ENST00000577308 85 ntBASIC2.77□□□□□ -1.97
TPM1P09493 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.77□□□□□ -1.97
TPM1P09493 OR1M4P-201ENST00000589199 287 ntBASIC2.77□□□□□ -1.97
TPM1P09493 UCA1.1-201ENST00000620952 75 ntBASIC2.77□□□□□ -1.97
TPM1P09493 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.77□□□□□ -1.97
TPM1P09493 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TPM1P09493 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
TPM1P09493 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TPM1P09493 SDAD1P2-201ENST00000441308 2028 ntBASIC2.76□□□□□ -1.97
TPM1P09493 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
TPM1P09493 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TPM1P09493 RPS3AP25-201ENST00000411660 793 ntBASIC2.76□□□□□ -1.97
TPM1P09493 USP9YP27-201ENST00000418455 438 ntBASIC2.76□□□□□ -1.97
TPM1P09493 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.76□□□□□ -1.97
TPM1P09493 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.76□□□□□ -1.97
TPM1P09493 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.76□□□□□ -1.97
TPM1P09493 AC090774.1-201ENST00000435925 246 ntBASIC2.76□□□□□ -1.97
TPM1P09493 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.76□□□□□ -1.97
TPM1P09493 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.76□□□□□ -1.97
TPM1P09493 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.76□□□□□ -1.97
TPM1P09493 AL049714.1-201ENST00000466686 347 ntBASIC2.76□□□□□ -1.97
TPM1P09493 AC135721.1-201ENST00000497954 479 ntBASIC2.76□□□□□ -1.97
TPM1P09493 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TPM1P09493 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TPM1P09493 VN1R104P-201ENST00000505115 1009 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms