Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 KLRA1P-201ENST00000503499 986 ntBASIC2.43□□□□□ -2.02
MT-ND4P03905 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
MT-ND4P03905 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
MT-ND4P03905 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.43□□□□□ -2.02
MT-ND4P03905 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.43□□□□□ -2.02
MT-ND4P03905 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.43□□□□□ -2.02
MT-ND4P03905 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.43□□□□□ -2.02
MT-ND4P03905 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.43□□□□□ -2.02
MT-ND4P03905 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.43□□□□□ -2.02
MT-ND4P03905 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
MT-ND4P03905 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.43□□□□□ -2.02
MT-ND4P03905 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.43□□□□□ -2.02
MT-ND4P03905 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.43□□□□□ -2.02
MT-ND4P03905 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.43□□□□□ -2.02
MT-ND4P03905 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.43□□□□□ -2.02
MT-ND4P03905 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.43□□□□□ -2.02
MT-ND4P03905 AC010620.2-201ENST00000600135 313 ntBASIC2.43□□□□□ -2.02
MT-ND4P03905 AC010975.3-201ENST00000618727 978 ntBASIC2.43□□□□□ -2.02
MT-ND4P03905 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.43□□□□□ -2.02
MT-ND4P03905 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.43□□□□□ -2.02
MT-ND4P03905 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
MT-ND4P03905 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.43□□□□□ -2.02
MT-ND4P03905 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
MT-ND4P03905 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
MT-ND4P03905 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
MT-ND4P03905 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.42□□□□□ -2.02
MT-ND4P03905 SNORA25.6-201ENST00000364121 118 ntBASIC2.42□□□□□ -2.02
MT-ND4P03905 DEFA7P-201ENST00000382676 285 ntBASIC2.42□□□□□ -2.02
MT-ND4P03905 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
MT-ND4P03905 SNORD65.1-201ENST00000390889 71 ntBASIC2.42□□□□□ -2.02
MT-ND4P03905 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.42□□□□□ -2.02
MT-ND4P03905 HMGN2P35-201ENST00000412164 270 ntBASIC2.42□□□□□ -2.02
MT-ND4P03905 AL513477.1-202ENST00000417061 214 ntBASIC2.42□□□□□ -2.02
MT-ND4P03905 AL137014.1-201ENST00000420490 1226 ntBASIC2.42□□□□□ -2.02
MT-ND4P03905 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.42□□□□□ -2.02
MT-ND4P03905 SEPT7P5-201ENST00000434048 306 ntBASIC2.42□□□□□ -2.02
MT-ND4P03905 AP000949.1-201ENST00000438328 629 ntBASIC2.42□□□□□ -2.02
MT-ND4P03905 PTGES3P1-201ENST00000439531 483 ntBASIC2.42□□□□□ -2.02
MT-ND4P03905 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.42□□□□□ -2.02
MT-ND4P03905 ST13P20-201ENST00000447996 1065 ntBASIC2.42□□□□□ -2.02
MT-ND4P03905 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.42□□□□□ -2.02
MT-ND4P03905 AC034236.1-201ENST00000469891 373 ntBASIC2.42□□□□□ -2.02
MT-ND4P03905 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.42□□□□□ -2.02
MT-ND4P03905 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.42□□□□□ -2.02
MT-ND4P03905 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.42□□□□□ -2.02
MT-ND4P03905 AC009812.2-201ENST00000517657 457 ntBASIC2.42□□□□□ -2.02
MT-ND4P03905 AC068339.2-201ENST00000534395 618 ntBASIC2.42□□□□□ -2.02
MT-ND4P03905 AL355836.1-201ENST00000555951 870 ntBASIC2.42□□□□□ -2.02
MT-ND4P03905 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.42□□□□□ -2.02
MT-ND4P03905 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.42□□□□□ -2.02
MT-ND4P03905 MED28P6-201ENST00000558776 231 ntBASIC2.42□□□□□ -2.02
MT-ND4P03905 AC138915.2-201ENST00000569776 97 ntBASIC2.42□□□□□ -2.02
MT-ND4P03905 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.42□□□□□ -2.02
MT-ND4P03905 MIR3605-201ENST00000583214 100 ntBASIC2.42□□□□□ -2.02
MT-ND4P03905 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.42□□□□□ -2.02
MT-ND4P03905 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.42□□□□□ -2.02
MT-ND4P03905 RPL23AP78-201ENST00000599928 470 ntBASIC2.42□□□□□ -2.02
MT-ND4P03905 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.42□□□□□ -2.02
MT-ND4P03905 U73023.1-201ENST00000603134 700 ntBASIC2.42□□□□□ -2.02
MT-ND4P03905 AC124016.2-201ENST00000610058 665 ntBASIC2.42□□□□□ -2.02
MT-ND4P03905 AL512427.1-201ENST00000618593 349 ntBASIC2.42□□□□□ -2.02
MT-ND4P03905 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.42□□□□□ -2.02
MT-ND4P03905 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.42□□□□□ -2.02
MT-ND4P03905 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.42□□□□□ -2.02
MT-ND4P03905 U6.101-201ENST00000637707 76 ntBASIC2.42□□□□□ -2.02
MT-ND4P03905 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
MT-ND4P03905 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
MT-ND4P03905 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
MT-ND4P03905 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
MT-ND4P03905 SNORA9.2-201ENST00000365361 133 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.41□□□□□ -2.02
MT-ND4P03905 SNORA1.3-201ENST00000384676 136 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
MT-ND4P03905 AL079342.2-201ENST00000403367 482 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 RPS15AP38-201ENST00000413110 372 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.41□□□□□ -2.02
MT-ND4P03905 AL513175.2-201ENST00000422071 443 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
MT-ND4P03905 DPRXP1-201ENST00000426312 460 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.41□□□□□ -2.02
MT-ND4P03905 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.41□□□□□ -2.02
MT-ND4P03905 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.41□□□□□ -2.02
MT-ND4P03905 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.41□□□□□ -2.02
MT-ND4P03905 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.41□□□□□ -2.02
MT-ND4P03905 RPL37P4-201ENST00000448908 268 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 AC079776.3-201ENST00000450665 370 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.41□□□□□ -2.02
MT-ND4P03905 USP9YP34-201ENST00000453983 808 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.41□□□□□ -2.02
MT-ND4P03905 RFC5P1-201ENST00000454419 874 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 Z82190.1-201ENST00000454534 490 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.41□□□□□ -2.02
MT-ND4P03905 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.41□□□□□ -2.02
MT-ND4P03905 AP001025.2-201ENST00000490908 477 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.41□□□□□ -2.02
MT-ND4P03905 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
MT-ND4P03905 AC010460.2-201ENST00000509054 677 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 HMGB1P41-201ENST00000520234 440 ntBASIC2.41□□□□□ -2.02
MT-ND4P03905 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms