Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
APOEP02649 RNA5SP139-201ENST00000364340 117 ntBASIC2.53□□□□□ -2
APOEP02649 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.53□□□□□ -2
APOEP02649 SNORA41-201ENST00000384675 132 ntBASIC2.53□□□□□ -2
APOEP02649 SNORA80E-201ENST00000384744 137 ntBASIC2.53□□□□□ -2
APOEP02649 MIR627-201ENST00000384979 97 ntBASIC2.53□□□□□ -2
APOEP02649 MIR493-201ENST00000385254 89 ntBASIC2.53□□□□□ -2
APOEP02649 RNU6-821P-201ENST00000390995 107 ntBASIC2.53□□□□□ -2
APOEP02649 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.53□□□□□ -2
APOEP02649 AC096632.1-201ENST00000427395 310 ntBASIC2.53□□□□□ -2
APOEP02649 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.53□□□□□ -2
APOEP02649 AC104073.1-201ENST00000451988 151 ntBASIC2.53□□□□□ -2
APOEP02649 AL359385.1-201ENST00000456509 365 ntBASIC2.53□□□□□ -2
APOEP02649 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.53□□□□□ -2
APOEP02649 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.53□□□□□ -2
APOEP02649 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
APOEP02649 AP001804.3-201ENST00000525146 880 ntBASIC2.53□□□□□ -2
APOEP02649 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.53□□□□□ -2
APOEP02649 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.53□□□□□ -2
APOEP02649 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.53□□□□□ -2
APOEP02649 AC012669.1-201ENST00000603209 283 ntBASIC2.53□□□□□ -2
APOEP02649 MIR6895-201ENST00000613497 78 ntBASIC2.53□□□□□ -2
APOEP02649 AC073968.1-201ENST00000618594 637 ntBASIC2.53□□□□□ -2
APOEP02649 VN1R7P-201ENST00000619242 903 ntBASIC2.53□□□□□ -2
APOEP02649 AL590396.2-201ENST00000636511 1041 ntBASIC2.53□□□□□ -2
APOEP02649 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
APOEP02649 AL359693.1-201ENST00000614959 2407 ntBASIC2.52□□□□□ -2.01
APOEP02649 AC111188.2-201ENST00000529697 1387 ntBASIC2.52□□□□□ -2.01
APOEP02649 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
APOEP02649 FRG1BP-201ENST00000278882 761 ntBASIC2.52□□□□□ -2.01
APOEP02649 RNU4-82P-201ENST00000362443 140 ntBASIC2.52□□□□□ -2.01
APOEP02649 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.52□□□□□ -2.01
APOEP02649 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.52□□□□□ -2.01
APOEP02649 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
APOEP02649 AL035410.1-201ENST00000427409 427 ntBASIC2.52□□□□□ -2.01
APOEP02649 AC098826.1-201ENST00000433943 471 ntBASIC2.52□□□□□ -2.01
APOEP02649 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.52□□□□□ -2.01
APOEP02649 FABP5P3-201ENST00000437960 408 ntBASIC2.52□□□□□ -2.01
APOEP02649 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.52□□□□□ -2.01
APOEP02649 RPS26P30-201ENST00000443431 335 ntBASIC2.52□□□□□ -2.01
APOEP02649 SNRPGP6-201ENST00000451124 220 ntBASIC2.52□□□□□ -2.01
APOEP02649 EEF1B2P7-201ENST00000451177 676 ntBASIC2.52□□□□□ -2.01
APOEP02649 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.52□□□□□ -2.01
APOEP02649 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
APOEP02649 AC023424.2-201ENST00000493479 777 ntBASIC2.52□□□□□ -2.01
APOEP02649 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.52□□□□□ -2.01
APOEP02649 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
APOEP02649 AC234781.5-201ENST00000508429 271 ntBASIC2.52□□□□□ -2.01
APOEP02649 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.52□□□□□ -2.01
APOEP02649 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
APOEP02649 AC017037.2-201ENST00000513850 890 ntBASIC2.52□□□□□ -2.01
APOEP02649 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.52□□□□□ -2.01
APOEP02649 IGLV3-17-201ENST00000519099 244 ntBASIC2.52□□□□□ -2.01
APOEP02649 OR10V3P-201ENST00000525712 725 ntBASIC2.52□□□□□ -2.01
APOEP02649 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.52□□□□□ -2.01
APOEP02649 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.52□□□□□ -2.01
APOEP02649 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.52□□□□□ -2.01
APOEP02649 AC027104.1-201ENST00000563702 681 ntBASIC2.52□□□□□ -2.01
APOEP02649 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.52□□□□□ -2.01
APOEP02649 FAM60BP-201ENST00000578364 658 ntBASIC2.52□□□□□ -2.01
APOEP02649 MIR4513-201ENST00000581077 86 ntBASIC2.52□□□□□ -2.01
APOEP02649 TPMTP1-201ENST00000592307 737 ntBASIC2.52□□□□□ -2.01
APOEP02649 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.52□□□□□ -2.01
APOEP02649 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.52□□□□□ -2.01
APOEP02649 U73023.1-201ENST00000603134 700 ntBASIC2.52□□□□□ -2.01
APOEP02649 AL355812.1-201ENST00000603215 216 ntBASIC2.52□□□□□ -2.01
APOEP02649 AC021851.1-201ENST00000608537 1082 ntBASIC2.52□□□□□ -2.01
APOEP02649 AC006329.2-201ENST00000611491 394 ntBASIC2.52□□□□□ -2.01
APOEP02649 AC083865.1-201ENST00000636634 831 ntBASIC2.52□□□□□ -2.01
APOEP02649 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.52□□□□□ -2.01
APOEP02649 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
APOEP02649 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
APOEP02649 AC090740.1-201ENST00000623193 2262 ntBASIC2.51□□□□□ -2.01
APOEP02649 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.51□□□□□ -2.01
APOEP02649 XKRY2-201ENST00000442362 1093 ntBASIC2.51□□□□□ -2.01
APOEP02649 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.51□□□□□ -2.01
APOEP02649 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC2.51□□□□□ -2.01
APOEP02649 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.51□□□□□ -2.01
APOEP02649 RPS4XP6-201ENST00000477670 797 ntBASIC2.51□□□□□ -2.01
APOEP02649 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.51□□□□□ -2.01
APOEP02649 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.51□□□□□ -2.01
APOEP02649 AC087808.1-201ENST00000520501 361 ntBASIC2.51□□□□□ -2.01
APOEP02649 SUB1P1-201ENST00000524415 382 ntBASIC2.51□□□□□ -2.01
APOEP02649 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.51□□□□□ -2.01
APOEP02649 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.51□□□□□ -2.01
APOEP02649 AC021269.2-201ENST00000532318 330 ntBASIC2.51□□□□□ -2.01
APOEP02649 PRELID2P1-201ENST00000552837 301 ntBASIC2.51□□□□□ -2.01
APOEP02649 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.51□□□□□ -2.01
APOEP02649 AC106028.5-201ENST00000610332 395 ntBASIC2.51□□□□□ -2.01
APOEP02649 AL138880.2-201ENST00000616214 239 ntBASIC2.51□□□□□ -2.01
APOEP02649 AC040168.1-201ENST00000623594 991 ntBASIC2.51□□□□□ -2.01
APOEP02649 AP003400.6-201ENST00000624698 740 ntBASIC2.51□□□□□ -2.01
APOEP02649 CYP3A51P-201ENST00000633513 256 ntBASIC2.51□□□□□ -2.01
APOEP02649 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
APOEP02649 ZNF90P1-201ENST00000480493 1951 ntBASIC2.5□□□□□ -2.01
APOEP02649 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
APOEP02649 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
APOEP02649 RNU6-1339P-201ENST00000363574 91 ntBASIC2.5□□□□□ -2.01
APOEP02649 SNORD114-30-201ENST00000364448 72 ntBASIC2.5□□□□□ -2.01
APOEP02649 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms