Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AL670379.9-201ENST00000605428 253 ntBASIC2.16□□□□□ -2.06
COL4A1P02462 AL670379.7-201ENST00000605823 252 ntBASIC2.16□□□□□ -2.06
COL4A1P02462 AC024560.3-201ENST00000608482 349 ntBASIC2.16□□□□□ -2.06
COL4A1P02462 AC005156.1-201ENST00000613371 573 ntBASIC2.16□□□□□ -2.06
COL4A1P02462 SNORA50A-202ENST00000629536 136 ntBASIC2.16□□□□□ -2.06
COL4A1P02462 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
COL4A1P02462 AL139811.1-201ENST00000424779 2299 ntBASIC2.16□□□□□ -2.06
COL4A1P02462 MIRLET7G-201ENST00000362280 84 ntBASIC2.15□□□□□ -2.06
COL4A1P02462 RNU6-670P-201ENST00000364312 104 ntBASIC2.15□□□□□ -2.06
COL4A1P02462 RNU6-1251P-201ENST00000364502 107 ntBASIC2.15□□□□□ -2.06
COL4A1P02462 MIR591-201ENST00000385290 95 ntBASIC2.15□□□□□ -2.06
COL4A1P02462 MT-TP-201ENST00000387461 68 ntBASIC2.15□□□□□ -2.06
COL4A1P02462 AC240504.1-201ENST00000395709 845 ntBASIC2.15□□□□□ -2.06
COL4A1P02462 AC019129.1-201ENST00000403786 261 ntBASIC2.15□□□□□ -2.06
COL4A1P02462 AL096701.2-201ENST00000416920 238 ntBASIC2.15□□□□□ -2.06
COL4A1P02462 TRAPPC2P5-201ENST00000426293 308 ntBASIC2.15□□□□□ -2.06
COL4A1P02462 NEK4P1-201ENST00000433383 879 ntBASIC2.15□□□□□ -2.06
COL4A1P02462 HMGB1P12-201ENST00000438594 598 ntBASIC2.15□□□□□ -2.06
COL4A1P02462 AL590664.1-201ENST00000448065 339 ntBASIC2.15□□□□□ -2.06
COL4A1P02462 MTND5P4-201ENST00000514978 288 ntBASIC2.15□□□□□ -2.06
COL4A1P02462 RNU2-58P-201ENST00000516403 183 ntBASIC2.15□□□□□ -2.06
COL4A1P02462 SNORA25.15-201ENST00000516487 89 ntBASIC2.15□□□□□ -2.06
COL4A1P02462 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.15□□□□□ -2.06
COL4A1P02462 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.15□□□□□ -2.06
COL4A1P02462 AC011468.4-201ENST00000603942 409 ntBASIC2.15□□□□□ -2.06
COL4A1P02462 AL645939.4-201ENST00000604495 135 ntBASIC2.15□□□□□ -2.06
COL4A1P02462 AC034236.3-201ENST00000605999 461 ntBASIC2.15□□□□□ -2.06
COL4A1P02462 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
COL4A1P02462 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.15□□□□□ -2.06
COL4A1P02462 AL359715.4-201ENST00000606629 1436 ntBASIC2.15□□□□□ -2.06
COL4A1P02462 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
COL4A1P02462 RNA5SP295-201ENST00000362655 121 ntBASIC2.15□□□□□ -2.07
COL4A1P02462 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.15□□□□□ -2.07
COL4A1P02462 AL645568.3-201ENST00000433683 316 ntBASIC2.15□□□□□ -2.07
COL4A1P02462 SSXP1-201ENST00000453640 473 ntBASIC2.15□□□□□ -2.07
COL4A1P02462 USP9YP10-201ENST00000454868 628 ntBASIC2.15□□□□□ -2.07
COL4A1P02462 C1DP3-201ENST00000455013 423 ntBASIC2.15□□□□□ -2.07
COL4A1P02462 SNORD108-201ENST00000459332 71 ntBASIC2.15□□□□□ -2.07
COL4A1P02462 AC092754.2-201ENST00000463506 460 ntBASIC2.15□□□□□ -2.07
COL4A1P02462 AC117525.1-201ENST00000515228 503 ntBASIC2.15□□□□□ -2.07
COL4A1P02462 SMARCE1P4-201ENST00000523647 241 ntBASIC2.15□□□□□ -2.07
COL4A1P02462 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.15□□□□□ -2.07
COL4A1P02462 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.15□□□□□ -2.07
COL4A1P02462 AC008083.2-201ENST00000546707 476 ntBASIC2.15□□□□□ -2.07
COL4A1P02462 AC067805.1-201ENST00000559344 470 ntBASIC2.15□□□□□ -2.07
COL4A1P02462 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.15□□□□□ -2.07
COL4A1P02462 AL356280.1-201ENST00000603614 379 ntBASIC2.15□□□□□ -2.07
COL4A1P02462 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
COL4A1P02462 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL4A1P02462 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.14□□□□□ -2.07
COL4A1P02462 MTCYBP29-201ENST00000436327 1006 ntBASIC2.14□□□□□ -2.07
COL4A1P02462 RPS29P12-201ENST00000460178 152 ntBASIC2.14□□□□□ -2.07
COL4A1P02462 PCNAP1-201ENST00000505363 709 ntBASIC2.14□□□□□ -2.07
COL4A1P02462 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
COL4A1P02462 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
COL4A1P02462 RNU6-889P-201ENST00000517189 103 ntBASIC2.14□□□□□ -2.07
COL4A1P02462 AC022784.5-201ENST00000522241 437 ntBASIC2.14□□□□□ -2.07
COL4A1P02462 AC009268.1-201ENST00000561352 1203 ntBASIC2.14□□□□□ -2.07
COL4A1P02462 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.14□□□□□ -2.07
COL4A1P02462 MIR4458-201ENST00000578872 75 ntBASIC2.14□□□□□ -2.07
COL4A1P02462 HMGB1P51-201ENST00000605166 638 ntBASIC2.14□□□□□ -2.07
COL4A1P02462 AL391813.2-201ENST00000609113 322 ntBASIC2.14□□□□□ -2.07
COL4A1P02462 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.14□□□□□ -2.07
COL4A1P02462 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
COL4A1P02462 UBE2L2-201ENST00000254302 429 ntBASIC2.13□□□□□ -2.07
COL4A1P02462 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC2.13□□□□□ -2.07
COL4A1P02462 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
COL4A1P02462 RNU6-532P-201ENST00000384318 107 ntBASIC2.13□□□□□ -2.07
COL4A1P02462 SNORA67.5-201ENST00000391036 107 ntBASIC2.13□□□□□ -2.07
COL4A1P02462 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.13□□□□□ -2.07
COL4A1P02462 RPL17P12-201ENST00000413391 526 ntBASIC2.13□□□□□ -2.07
COL4A1P02462 RAD23BP2-201ENST00000416003 1207 ntBASIC2.13□□□□□ -2.07
COL4A1P02462 RPS7P5-201ENST00000441482 581 ntBASIC2.13□□□□□ -2.07
COL4A1P02462 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.13□□□□□ -2.07
COL4A1P02462 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC2.13□□□□□ -2.07
COL4A1P02462 PTGES3P5-201ENST00000455109 434 ntBASIC2.13□□□□□ -2.07
COL4A1P02462 RNU6-775P-201ENST00000459318 96 ntBASIC2.13□□□□□ -2.07
COL4A1P02462 AC087190.1-201ENST00000484462 480 ntBASIC2.13□□□□□ -2.07
COL4A1P02462 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.13□□□□□ -2.07
COL4A1P02462 NDUFA5P6-201ENST00000542110 379 ntBASIC2.13□□□□□ -2.07
COL4A1P02462 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.13□□□□□ -2.07
COL4A1P02462 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.13□□□□□ -2.07
COL4A1P02462 VN1R84P-201ENST00000593697 235 ntBASIC2.13□□□□□ -2.07
COL4A1P02462 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.13□□□□□ -2.07
COL4A1P02462 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.13□□□□□ -2.07
COL4A1P02462 AC131280.1-202ENST00000624067 4211 ntBASIC2.13□□□□□ -2.07
COL4A1P02462 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
COL4A1P02462 API5P2-201ENST00000397055 1498 ntBASIC2.13□□□□□ -2.07
COL4A1P02462 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL4A1P02462 RNU4-13P-201ENST00000364019 141 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 SNORD65-201ENST00000391079 73 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
COL4A1P02462 RFESDP1-201ENST00000422350 461 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 AC114973.1-201ENST00000429057 632 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 NDUFA5P4-201ENST00000436704 385 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.12□□□□□ -2.07
COL4A1P02462 CALM1P2-201ENST00000452941 448 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 RNU7-95P-201ENST00000459222 64 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 snoU13.18-201ENST00000459483 104 ntBASIC2.12□□□□□ -2.07
COL4A1P02462 AC104629.2-201ENST00000468627 598 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms