Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
NKX2-2O95096 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.53□□□□□ -1.84
NKX2-2O95096 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NKX2-2O95096 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.53□□□□□ -1.84
NKX2-2O95096 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NKX2-2O95096 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
NKX2-2O95096 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
NKX2-2O95096 SNORA75-201ENST00000384158 137 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 RNU1-89P-201ENST00000384592 164 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 SNORA40.3-201ENST00000390964 122 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 HMGN2P8-201ENST00000391458 268 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 FCF1P10-201ENST00000407590 479 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 SNORA3.3-201ENST00000408712 125 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 RNU6-628P-201ENST00000410675 107 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX2-2O95096 MTCO2P34-201ENST00000421994 607 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.53□□□□□ -1.84
NKX2-2O95096 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.53□□□□□ -1.84
NKX2-2O95096 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
NKX2-2O95096 SNORA71B-202ENST00000439232 272 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.53□□□□□ -1.84
NKX2-2O95096 AL022238.1-201ENST00000442557 355 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 MTND6P13-201ENST00000443510 523 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 AL162389.1-201ENST00000449233 177 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 AL033528.1-201ENST00000453780 140 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX2-2O95096 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX2-2O95096 snoU109.1-201ENST00000459339 135 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 RAP1BP2-201ENST00000478270 544 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.53□□□□□ -1.84
NKX2-2O95096 AC108860.1-201ENST00000484521 383 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 LARP1BP2-201ENST00000486594 519 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 TRBV12-2-201ENST00000489763 344 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 AC020893.1-201ENST00000502452 580 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX2-2O95096 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX2-2O95096 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NKX2-2O95096 RNA5SP468-201ENST00000516782 93 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 AP002963.1-201ENST00000530590 184 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.53□□□□□ -1.84
NKX2-2O95096 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 CYCSP30-201ENST00000546447 172 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.53□□□□□ -1.84
NKX2-2O95096 AC006362.1-201ENST00000567392 174 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX2-2O95096 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX2-2O95096 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.53□□□□□ -1.84
NKX2-2O95096 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.53□□□□□ -1.84
NKX2-2O95096 MIR3146-201ENST00000580367 79 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX2-2O95096 HMGN1P30-201ENST00000589286 268 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.53□□□□□ -1.84
NKX2-2O95096 AC022146.1-201ENST00000595307 847 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 BDH2P1-201ENST00000602288 736 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 AC020910.2-201ENST00000603635 610 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 AC121334.2-201ENST00000605387 271 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 AC004067.1-201ENST00000608733 700 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 AC011939.3-201ENST00000613686 466 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 AC010678.1-201ENST00000614118 713 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 AC079684.1-201ENST00000621405 437 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 AC091905.1-201ENST00000624400 311 ntBASIC3.53□□□□□ -1.84
NKX2-2O95096 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.53□□□□□ -1.84
NKX2-2O95096 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NKX2-2O95096 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.85
NKX2-2O95096 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
NKX2-2O95096 AC005832.2-201ENST00000538921 1430 ntBASIC3.53□□□□□ -1.85
NKX2-2O95096 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NKX2-2O95096 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.52□□□□□ -1.85
NKX2-2O95096 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.52□□□□□ -1.85
NKX2-2O95096 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
NKX2-2O95096 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NKX2-2O95096 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.52□□□□□ -1.85
NKX2-2O95096 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
NKX2-2O95096 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.52□□□□□ -1.85
NKX2-2O95096 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NKX2-2O95096 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NKX2-2O95096 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.52□□□□□ -1.85
NKX2-2O95096 RNU6-297P-201ENST00000384636 107 ntBASIC3.52□□□□□ -1.85
NKX2-2O95096 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
NKX2-2O95096 AL109755.1-201ENST00000401791 649 ntBASIC3.52□□□□□ -1.85
NKX2-2O95096 RNU6-248P-201ENST00000410720 107 ntBASIC3.52□□□□□ -1.85
NKX2-2O95096 RPS3AP3-201ENST00000411933 242 ntBASIC3.52□□□□□ -1.85
NKX2-2O95096 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.52□□□□□ -1.85
NKX2-2O95096 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.52□□□□□ -1.85
NKX2-2O95096 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.52□□□□□ -1.85
NKX2-2O95096 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.52□□□□□ -1.85
NKX2-2O95096 AC006366.1-201ENST00000422002 759 ntBASIC3.52□□□□□ -1.85
NKX2-2O95096 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.52□□□□□ -1.85
NKX2-2O95096 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.52□□□□□ -1.85
NKX2-2O95096 AC091390.1-201ENST00000433904 331 ntBASIC3.52□□□□□ -1.85
NKX2-2O95096 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.52□□□□□ -1.85
NKX2-2O95096 TIMM9P1-201ENST00000436122 256 ntBASIC3.52□□□□□ -1.85
NKX2-2O95096 HMGB1P12-201ENST00000438594 598 ntBASIC3.52□□□□□ -1.85
NKX2-2O95096 AC006480.1-201ENST00000449887 378 ntBASIC3.52□□□□□ -1.85
NKX2-2O95096 AC133473.1-201ENST00000455173 299 ntBASIC3.52□□□□□ -1.85
NKX2-2O95096 AC099563.1-201ENST00000456086 418 ntBASIC3.52□□□□□ -1.85
NKX2-2O95096 AC108059.3-201ENST00000456388 214 ntBASIC3.52□□□□□ -1.85
NKX2-2O95096 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.52□□□□□ -1.85
NKX2-2O95096 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms