Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AMD1P1-201ENST00000457220 922 ntBASIC3.62□□□□□ -1.83
LDB3O75112 BTF3P5-201ENST00000457252 467 ntBASIC3.62□□□□□ -1.83
LDB3O75112 RPS3AP17-201ENST00000472594 777 ntBASIC3.62□□□□□ -1.83
LDB3O75112 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
LDB3O75112 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.62□□□□□ -1.83
LDB3O75112 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.62□□□□□ -1.83
LDB3O75112 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.62□□□□□ -1.83
LDB3O75112 AC117522.1-201ENST00000509821 380 ntBASIC3.62□□□□□ -1.83
LDB3O75112 AC108043.1-201ENST00000512696 574 ntBASIC3.62□□□□□ -1.83
LDB3O75112 AC034159.1-201ENST00000513885 583 ntBASIC3.62□□□□□ -1.83
LDB3O75112 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.62□□□□□ -1.83
LDB3O75112 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.62□□□□□ -1.83
LDB3O75112 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.62□□□□□ -1.83
LDB3O75112 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.62□□□□□ -1.83
LDB3O75112 AC006960.3-201ENST00000561845 705 ntBASIC3.62□□□□□ -1.83
LDB3O75112 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.62□□□□□ -1.83
LDB3O75112 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.62□□□□□ -1.83
LDB3O75112 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.62□□□□□ -1.83
LDB3O75112 AC112230.1-201ENST00000604342 547 ntBASIC3.62□□□□□ -1.83
LDB3O75112 AC090578.1-201ENST00000604955 591 ntBASIC3.62□□□□□ -1.83
LDB3O75112 AL354798.1-201ENST00000622505 329 ntBASIC3.62□□□□□ -1.83
LDB3O75112 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.62□□□□□ -1.83
LDB3O75112 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.62□□□□□ -1.83
LDB3O75112 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.62□□□□□ -1.83
LDB3O75112 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
LDB3O75112 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LDB3O75112 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LDB3O75112 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LDB3O75112 AC006378.2-201ENST00000623178 2476 ntBASIC3.62□□□□□ -1.83
LDB3O75112 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.62□□□□□ -1.83
LDB3O75112 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
LDB3O75112 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.62□□□□□ -1.83
LDB3O75112 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
LDB3O75112 NUP58P1-201ENST00000502546 1738 ntBASIC3.61□□□□□ -1.83
LDB3O75112 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.61□□□□□ -1.83
LDB3O75112 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.61□□□□□ -1.83
LDB3O75112 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.61□□□□□ -1.83
LDB3O75112 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LDB3O75112 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.61□□□□□ -1.83
LDB3O75112 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
LDB3O75112 RN7SKP280-201ENST00000364196 304 ntBASIC3.61□□□□□ -1.83
LDB3O75112 RNU6-339P-201ENST00000384310 107 ntBASIC3.61□□□□□ -1.83
LDB3O75112 MIR30B-201ENST00000384850 88 ntBASIC3.61□□□□□ -1.83
LDB3O75112 MIR199A2-201ENST00000385289 110 ntBASIC3.61□□□□□ -1.83
LDB3O75112 RNA5SP239-201ENST00000410218 129 ntBASIC3.61□□□□□ -1.83
LDB3O75112 RNU6-195P-201ENST00000411352 109 ntBASIC3.61□□□□□ -1.83
LDB3O75112 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.61□□□□□ -1.83
LDB3O75112 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.61□□□□□ -1.83
LDB3O75112 AC069157.1-201ENST00000421749 137 ntBASIC3.61□□□□□ -1.83
LDB3O75112 AL391219.1-201ENST00000422570 483 ntBASIC3.61□□□□□ -1.83
LDB3O75112 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.61□□□□□ -1.83
LDB3O75112 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.61□□□□□ -1.83
LDB3O75112 AL358934.1-201ENST00000432346 324 ntBASIC3.61□□□□□ -1.83
LDB3O75112 RPS6P12-201ENST00000432491 726 ntBASIC3.61□□□□□ -1.83
LDB3O75112 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.61□□□□□ -1.83
LDB3O75112 AC127537.2-201ENST00000439258 465 ntBASIC3.61□□□□□ -1.83
LDB3O75112 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.61□□□□□ -1.83
LDB3O75112 UBE2V1P7-201ENST00000446395 340 ntBASIC3.61□□□□□ -1.83
LDB3O75112 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.61□□□□□ -1.83
LDB3O75112 HMGN2P21-201ENST00000447764 270 ntBASIC3.61□□□□□ -1.83
LDB3O75112 USP9YP12-201ENST00000450481 570 ntBASIC3.61□□□□□ -1.83
LDB3O75112 SNRPFP4-201ENST00000456366 242 ntBASIC3.61□□□□□ -1.83
LDB3O75112 OR6K1P-201ENST00000456766 971 ntBASIC3.61□□□□□ -1.83
LDB3O75112 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.61□□□□□ -1.83
LDB3O75112 HMGB3P30-201ENST00000457863 606 ntBASIC3.61□□□□□ -1.83
LDB3O75112 AP000873.1-201ENST00000463987 400 ntBASIC3.61□□□□□ -1.83
LDB3O75112 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.61□□□□□ -1.83
LDB3O75112 AL139099.1-201ENST00000497398 403 ntBASIC3.61□□□□□ -1.83
LDB3O75112 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.61□□□□□ -1.83
LDB3O75112 AC108078.1-201ENST00000508073 725 ntBASIC3.61□□□□□ -1.83
LDB3O75112 MTCO3P44-201ENST00000510977 541 ntBASIC3.61□□□□□ -1.83
LDB3O75112 NPM1P41-201ENST00000512920 831 ntBASIC3.61□□□□□ -1.83
LDB3O75112 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.61□□□□□ -1.83
LDB3O75112 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.61□□□□□ -1.83
LDB3O75112 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.61□□□□□ -1.83
LDB3O75112 SNORA18.6-201ENST00000516792 115 ntBASIC3.61□□□□□ -1.83
LDB3O75112 RN7SKP116-201ENST00000516902 319 ntBASIC3.61□□□□□ -1.83
LDB3O75112 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.61□□□□□ -1.83
LDB3O75112 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.61□□□□□ -1.83
LDB3O75112 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.61□□□□□ -1.83
LDB3O75112 AL360157.1-201ENST00000565962 87 ntBASIC3.61□□□□□ -1.83
LDB3O75112 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.61□□□□□ -1.83
LDB3O75112 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.61□□□□□ -1.83
LDB3O75112 MIR4307-201ENST00000582802 84 ntBASIC3.61□□□□□ -1.83
LDB3O75112 AC009977.1-201ENST00000586015 570 ntBASIC3.61□□□□□ -1.83
LDB3O75112 VN1R79P-201ENST00000593540 513 ntBASIC3.61□□□□□ -1.83
LDB3O75112 BNIP3P8-201ENST00000597863 560 ntBASIC3.61□□□□□ -1.83
LDB3O75112 BCRP9-201ENST00000605312 388 ntBASIC3.61□□□□□ -1.83
LDB3O75112 HMGN2P28-201ENST00000606102 262 ntBASIC3.61□□□□□ -1.83
LDB3O75112 AC009994.1-201ENST00000606889 253 ntBASIC3.61□□□□□ -1.83
LDB3O75112 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.61□□□□□ -1.83
LDB3O75112 AC006338.1-201ENST00000618453 749 ntBASIC3.61□□□□□ -1.83
LDB3O75112 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.61□□□□□ -1.83
LDB3O75112 AC068880.5-201ENST00000624331 290 ntBASIC3.61□□□□□ -1.83
LDB3O75112 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.61□□□□□ -1.83
LDB3O75112 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.61□□□□□ -1.83
LDB3O75112 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
LDB3O75112 MIR6863-201ENST00000636112 90 ntBASIC3.61□□□□□ -1.83
LDB3O75112 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.61□□□□□ -1.83
LDB3O75112 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms